Protein Alignment HHEX and Hoxb2

DIOPT Version :10

• Sequence 1: NP_650938.2
• Gene: HHEX / 42495
• FlyBaseID: FBgn0038852
• Length: 323
• Species: Drosophila melanogaster
• Sequence 2: NP_001386664.1
• Gene: Hoxb2 / 100361765
• RGDID: 2319509
• Length: 355
• Species: Rattus norvegicus
• Alignment Length: 230
• Identity: 57/230 - (24%)
• Similarity: 81/230 - (35%)
• Gaps: 50/230 - (21%)

  Fly    62 SSAAPTPSPSSATNIYDLSREAAAAQ---YAMKSMDSSAVLAPTSLRFNPIYPDPASLFYQQVLQ 123
            |:..|.|.|........|...|:..|   ....:.|..|:..|..|   |:.|......:.:..:
  Rat    40 STLIPPPPPPLEQTFPSLQLGASTLQRPGSQKPAGDGPALRPPPPL---PVAPPAPEFPWMKEKK 101

  Fly   124 LQKNPSLFMPHFQAAAVAAAAAVQPTAYCDQYSPFTMDCEGFPNPASAAAALYCNAYPAASFYMS 188
            ..|.||      |:||..:.||....|            .|..:|:...
  Rat   102 SAKKPS------QSAATPSPAASSVRA------------SGVGSPSDGP---------------- 132

  Fly   189 NFGVKRKGG------QIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRA 247
              |:...||      :..:|:.|...||..|..:|||....|..:|..|.||:||||.||||||.
  Rat   133 --GLPESGGSGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRM 195

  Fly   248 KWRRANLSKRSASAQ--GPIAGAAVGSPSSASSSS 280
            |.:|....:.....:  |..|....|.|:...:.|
  Rat   196 KHKRQTQHREPPDGEPGGLSAQDDAGEPAEEPTVS 230

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
HHEX	NP_650938.2	Homeodomain	200..251	CDD:459649	24/50 (48%)
Hoxb2	NP_001386664.1	Homeodomain	143..199	CDD:459649	24/55 (44%)