DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and pax10

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:NP_001373372.1 Gene:pax10 / 100192208 ZFINID:ZDB-GENE-081022-10 Length:275 Species:Danio rerio


Alignment Length:94 Identity:30/94 - (31%)
Similarity:44/94 - (46%) Gaps:11/94 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 VKRK--GGQIRFTSQQTKNLEARFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANL 254
            :|||  ..:..||.:|...||..|..:.|.....|..||.::.|.:.:::.||.||||||||...
Zfish    70 LKRKLQRNRTSFTQEQIDALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEK 134

  Fly   255 SKRSASAQGPIAGAAVGSPSSASSSSVPV 283
            .:....:         ||.||.|.:..|:
Zfish   135 LRNQRRS---------GSSSSCSQTHTPL 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 19/50 (38%)
pax10NP_001373372.1 Homeodomain 76..131 CDD:459649 19/54 (35%)

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