DRSC/TRiP Functional Genomics Resources

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Protein Alignment HHEX and emx1l

DIOPT Version :10

Sequence 1:NP_650938.2 Gene:HHEX / 42495 FlyBaseID:FBgn0038852 Length:323 Species:Drosophila melanogaster
Sequence 2:XP_002936883.1 Gene:emx1l / 100101663 XenbaseID:XB-GENE-876649 Length:213 Species:Xenopus tropicalis


Alignment Length:181 Identity:53/181 - (29%)
Similarity:72/181 - (39%) Gaps:40/181 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 LAPTSLRFNPIYPDPASLFYQQVL----QLQKNPSLFMPHFQAAAVAAAAAVQPTAYCDQYSPFT 159
            |.||:|:    ||:|........|    :|...|.||.|             :|.|  ..|.|..
 Frog    26 LRPTALK----YPEPGHGLTPTPLRPGVRLLGAPDLFFP-------------EPAA--PPYGPSL 71

  Fly   160 MDCEGFP-------NPASAAAALYCNAYP----AASFYMSNFGVKRKGGQIR--FTSQQTKNLEA 211
                |.|       :|.|....:..:..|    ....|:.:....||..:||  |:..|...||.
 Frog    72 ----GLPQHRILHRDPLSFCPWILRHRLPGEENTPDNYLLHGPFSRKPKRIRTAFSPSQLLRLEG 132

  Fly   212 RFASSKYLSPEERRHLALQLKLTDRQVKTWFQNRRAKWRRANLSKRSASAQ 262
            .|..:.|:...||:.||..|.||:.|||.||||||.|.:|..|.:....:|
 Frog   133 AFEKNHYVVGAERKQLANSLCLTETQVKVWFQNRRTKHKRQKLEEECPESQ 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HHEXNP_650938.2 Homeodomain 200..251 CDD:459649 24/52 (46%)
emx1lXP_002936883.1 Homeodomain 116..172 CDD:459649 25/55 (45%)

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