DRSC/TRiP Functional Genomics Resources

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Protein Alignment dmrt93B and Dmrtc1a

DIOPT Version :10

Sequence 1:NP_524428.1 Gene:dmrt93B / 42494 FlyBaseID:FBgn0038851 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_006528343.1 Gene:Dmrtc1a / 70887 MGIID:1918137 Length:227 Species:Mus musculus


Alignment Length:192 Identity:40/192 - (20%)
Similarity:70/192 - (36%) Gaps:53/192 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 PRRD------NVSQTAIDMLAQLFPQRKRSVL-----ELVLKRCDLDLIRAIENVSPTGKS---- 220
            ||:|      :..:.|..:..:|..:.||::.     .:.:|:.      |:|....|||:    
Mouse    10 PRKDFSPVTTSKKEEATPLKRRLVERHKRTMAAAHPSHMHVKKL------AVEEGVRTGKNTVQQ 68

  Fly   221 --SPVDVTSNQLPSQEPGMLTTMPQ-------------------PAPPRSSAFRP-----VITDQ 259
              :.||..:.:..||.|.:|...|:                   |..|..::..|     :|...
Mouse    69 IQAQVDTATQEESSQGPVLLNQHPETTSVPYTPETVGQQLMVSLPGEPHGTSAMPSMCPSLILQP 133

  Fly   260 YQSKSVVELKPPVFGGSASAAAAAAICAYPKWFVPLSFPVTMGHLSNLAPR----CTLPNCA 317
            ..:...:.|:|.|.|.|||  ..|::.|..:|...|.....:..|.|.:..    |.:|..|
Mouse   134 CATTDPMLLQPQVMGPSAS--NQASVSATLEWQEMLEAAEALLALKNSSQTRHQPCGMPGTA 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmrt93BNP_524428.1 DM 39..85 CDD:459924
CUE_DMA 176..214 CDD:270553 7/42 (17%)
Dmrtc1aXP_006528343.1 DMRT-like 112..226 CDD:464871 20/84 (24%)
Blue background indicates that the domain is not in the aligned region.

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