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Protein Alignment dmrt93B and Dmrtc1a
DIOPT Version :9
Sequence 1: | NP_524428.1 |
Gene: | dmrt93B / 42494 |
FlyBaseID: | FBgn0038851 |
Length: | 325 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006528343.1 |
Gene: | Dmrtc1a / 70887 |
MGIID: | 1918137 |
Length: | 227 |
Species: | Mus musculus |
Alignment Length: | 192 |
Identity: | 40/192 - (20%) |
Similarity: | 70/192 - (36%) |
Gaps: | 53/192 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 171 PRRD------NVSQTAIDMLAQLFPQRKRSVL-----ELVLKRCDLDLIRAIENVSPTGKS---- 220
||:| :..:.|..:..:|..:.||::. .:.:|:. |:|....|||:
Mouse 10 PRKDFSPVTTSKKEEATPLKRRLVERHKRTMAAAHPSHMHVKKL------AVEEGVRTGKNTVQQ 68
Fly 221 --SPVDVTSNQLPSQEPGMLTTMPQ-------------------PAPPRSSAFRP-----VITDQ 259
:.||..:.:..||.|.:|...|: |..|..::..| :|...
Mouse 69 IQAQVDTATQEESSQGPVLLNQHPETTSVPYTPETVGQQLMVSLPGEPHGTSAMPSMCPSLILQP 133
Fly 260 YQSKSVVELKPPVFGGSASAAAAAAICAYPKWFVPLSFPVTMGHLSNLAPR----CTLPNCA 317
..:...:.|:|.|.|.||| ..|::.|..:|...|.....:..|.|.:.. |.:|..|
Mouse 134 CATTDPMLLQPQVMGPSAS--NQASVSATLEWQEMLEAAEALLALKNSSQTRHQPCGMPGTA 193
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
dmrt93B | NP_524428.1 |
DM |
39..85 |
CDD:279137 |
|
CUE_DMA |
176..214 |
CDD:270553 |
7/42 (17%) |
Dmrtc1a | XP_006528343.1 |
DMRT-like |
112..226 |
CDD:374115 |
20/84 (24%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3815 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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