DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dmrt93B and dmrt2b

DIOPT Version :10

Sequence 1:NP_524428.1 Gene:dmrt93B / 42494 FlyBaseID:FBgn0038851 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_001073445.1 Gene:dmrt2b / 558970 ZFINID:ZDB-GENE-080813-1 Length:364 Species:Danio rerio


Alignment Length:205 Identity:70/205 - (34%)
Similarity:97/205 - (47%) Gaps:42/205 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 EPTPAKVTNRVPKCARCRNHGIISELRGHKKLCTYKNCKCAKCVLIFERQRIMAAQVALKRQQAV 94
            |...|:..:|.||||||||||::|.|:|||:||.:::|:||.|:|:.||||:|||||||:||||.
Zfish    37 EAPAARRLSRSPKCARCRNHGVVSRLKGHKRLCRWRDCQCANCLLVVERQRVMAAQVALRRQQAT 101

  Fly    95 E-------DAIAMRLVANKTGRSIDALPPGNIFGLTVTQPS-----------SPRAKRE----DD 137
            |       .|:..|....:..|:...|....:.|.....|.           |.|.::.    |.
Zfish   102 EGKKGQKNSAVLRRTAYQRYTRAPSLLAKSILEGYKPPVPEDWPKRLHQPPVSVRMRKRRAFADK 166

  Fly   138 QVEKTISEVEQQHLKQREEEYSES-------PAVAQDLSAPRRDNVSQTAIDMLAQLFPQRKRSV 195
            ::|..:.|.|   |:|||.|...|       |:.......|..|.:..|.:       |..|.|.
Zfish   167 ELETVMLERE---LRQREIEELPSLLLQAVVPSAPSPYFFPLSDPIMPTFV-------PVSKNSP 221

  Fly   196 LELVLKRCDL 205
               .|..|||
Zfish   222 ---PLTDCDL 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmrt93BNP_524428.1 DM 39..85 CDD:459924 29/45 (64%)
CUE_DMA 176..214 CDD:270553 8/30 (27%)
dmrt2bNP_001073445.1 DM 46..92 CDD:459924 29/45 (64%)

Return to query results.
Submit another query.