DRSC/TRiP Functional Genomics Resources

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Protein Alignment dmrt93B and dmrt99B

DIOPT Version :9

Sequence 1:NP_524428.1 Gene:dmrt93B / 42494 FlyBaseID:FBgn0038851 Length:325 Species:Drosophila melanogaster
Sequence 2:NP_524549.1 Gene:dmrt99B / 43495 FlyBaseID:FBgn0039683 Length:510 Species:Drosophila melanogaster


Alignment Length:507 Identity:108/507 - (21%)
Similarity:162/507 - (31%) Gaps:233/507 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASSSGEPADEVANKRPRLVANPKATKIVEPTPAKVTNRVPKCARCRNHGIISELRGHKKLCTYK 65
            |:..||.....:.::.|.|.|.|.|..:  ...::...|.||||||||||::|.|:|||:.|.::
  Fly     1 MSLPSGVDMQNLMSQHPVLGALPPAFFL--RAASERYQRTPKCARCRNHGVVSALKGHKRYCRWR 63

  Fly    66 NCKCAKCVLIFERQRIMAAQVALKRQQAVEDAIAMRL------VANKTGRSIDALPP-------- 116
            :|.||||.||.||||:|||||||:||||.|:..|..|      |..:...|..|.|.        
  Fly    64 DCVCAKCTLIAERQRVMAAQVALRRQQAQEENEARELGLLYTSVPGQQNGSDSATPTPHSPNHSG 128

  Fly   117 --------------------------------------------------------------GN- 118
                                                                          || 
  Fly   129 SGGSGSGGSGQNGVFHGGIPSPPSDGFEASSTPNHHQQSQQQQQAHHQQHLSHPHQQSQRFNGNE 193

  Fly   119 -----------------------------------------------------------IFGLTV 124
                                                                       :|.||.
  Fly   194 SDTDGRTRSEHLSVGFSPTRTELDESPVSKRGAALSNETDQDTGSESGSPSSPRPKVAGLFNLTA 258

  Fly   125 T-------QPSSPRA------------------KREDDQVEKTI--------------------- 143
            :       .||||.:                  |:||.|.....                     
  Fly   259 SLSPARTGPPSSPESDLDVDSAPDEATPENLSLKKEDSQSPPNTPAENLHLLRSFSSSHAQGFLP 323

  Fly   144 ---------------------SEVEQQHLKQREEEYSESPAVAQDLSAPRRDNVSQTAIDMLAQL 187
                                 |...||..:|::::.:..|...|. ...::....::.||:|.::
  Fly   324 YHHTQFLAAAGLPAHHHPAAHSPHHQQQQQQQQQQQNHLPQHHQQ-QQQQQQQQQRSPIDVLMRV 387

  Fly   188 FPQRKRSVLELVLKRCDLDLIRAIENVSPTGKSSPVDVTSNQLPSQEPGMLTTMPQPAPPRSSAF 252
            ||.|:||.:|.:::|...|:::|:|.:. .|:.      ..|.|.|.|      |.|..|..|||
  Fly   388 FPNRRRSDVEQLMQRFRGDVLQAMECML-AGED------LGQTPPQVP------PSPPFPMKSAF 439

  Fly   253 RPVITDQYQSKSVVELKPPVFGGSASAAAAAAICAYPKWFVPLSFPVTMGHL 304
            .|::             ||...||.:......:.|:.|.|:...:..| |:|
  Fly   440 SPLV-------------PPSVFGSPTHRYHPFMQAHAKRFLTAPYAGT-GYL 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmrt93BNP_524428.1 DM 39..85 CDD:279137 30/45 (67%)
CUE_DMA 176..214 CDD:270553 13/37 (35%)
dmrt99BNP_524549.1 DM 37..83 CDD:279137 30/45 (67%)
CUE_DMA_DMRTA1 378..415 CDD:270600 13/36 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3815
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12322
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3693
SonicParanoid 1 1.000 - - X984
54.940

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