DRSC/TRiP Functional Genomics Resources

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Protein Alignment dmrt93B and Dmrtb1

DIOPT Version :10

Sequence 1:NP_524428.1 Gene:dmrt93B / 42494 FlyBaseID:FBgn0038851 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_063143794.1 Gene:Dmrtb1 / 313484 RGDID:1560921 Length:366 Species:Rattus norvegicus


Alignment Length:297 Identity:74/297 - (24%)
Similarity:102/297 - (34%) Gaps:96/297 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 RVPKCARCRNHGIISELRGHKKLCTYKNCKCAKCVLIFERQRIMAAQVALKRQQAVEDAIAM--- 100
            |.|||:||||||.:..::||...|.:|:|.|.||.||.|||:|||||..||.|...|....:   
  Rat     3 RTPKCSRCRNHGYLVPVKGHAGKCRWKHCICDKCYLITERQKIMAAQKVLKNQATEEQGATVGTQ 67

  Fly   101 ------------RLVANKTGRSIDALPPGNIFG------LTVTQPSSPRAKREDDQVEKTISEVE 147
                        ...|..:..||..||...:.|      .|.....||:|:              
  Rat    68 GPQLPPRAPAPAAATATASSSSICPLPRAALGGAGPGPAATCFLERSPQAR-------------- 118

  Fly   148 QQHLKQREEEYSESPAVAQDLSAPR------------RDNVSQTAIDMLAQLFPQRKRSVLELVL 200
                       |..|:..|.:.:.|            ...:.......|.||.||..|..|    
  Rat   119 -----------SPGPSAFQLVPSGRPGPSTFQPGSGGSGGLHDRPPAWLPQLRPQAPRPEL---- 168

  Fly   201 KRCDLDL---IRAIENVSPTGKSSPVDVTSNQL-----PSQE-----PGMLTTMP-QPAP----- 246
              |..|.   :|.:..:.......|:...|:.:     |.:|     |..:...| ||.|     
  Rat   169 --CCPDQHLPVRPVPRLPFADYGHPLRFKSDHVVGAGYPEREPFKQCPACIPVPPYQPFPLSEGQ 231

  Fly   247 --------PRSSAFRPVITDQYQSKSVV-----ELKP 270
                    |:...||.|....|...|:|     :|:|
  Rat   232 DSSSALGVPQQRGFRHVSCGPYHGNSLVSEPARDLQP 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dmrt93BNP_524428.1 DM 39..85 CDD:459924 26/45 (58%)
CUE_DMA 176..214 CDD:270553 10/40 (25%)
Dmrtb1XP_063143794.1 None

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