DRSC/TRiP Functional Genomics Resources

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Protein Alignment dmrt93B and DMRT1

DIOPT Version :9

Sequence 1:NP_524428.1 Gene:dmrt93B / 42494 FlyBaseID:FBgn0038851 Length:325 Species:Drosophila melanogaster
Sequence 2:XP_011516072.1 Gene:DMRT1 / 1761 HGNCID:2934 Length:390 Species:Homo sapiens


Alignment Length:223 Identity:50/223 - (22%)
Similarity:77/223 - (34%) Gaps:64/223 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 AQVALKRQQAVEDAI----------AMRLVANKTGRSIDALPPGNIFGLTVTQPSSPRAKREDDQ 138
            ::|||:||||.|:.:          |..|:..:.....:........|.:...|:|         
Human   133 SEVALRRQQAQEEELGISHPIPLPSAAELLVKRENNGSNPCLMTECSGTSQPPPAS--------- 188

  Fly   139 VEKTISEVEQQHLKQREEEYSESPAVAQDLSA-PRRDNVSQTAIDMLA-----------QLFPQR 191
            |..|.:              ||...|.||:.| ..|.:|..|. |:::           .|||..
Human   189 VPTTAA--------------SEGRMVIQDIPAVTSRGHVENTP-DLVSDSTYYSSFYQPSLFPYY 238

  Fly   192 KRSVLELVLKRC-DLDLIRAIENVS-----PTGKSSPVDVTSNQLPS-QEPGMLTTMPQPAPPRS 249
            ..      |..| ...:..|.::.|     |.| .|||..:...||. ..||.  |..|....::
Human   239 NN------LYNCPQYSMALAADSASGEVGNPLG-GSPVKNSLRGLPGPYVPGQ--TGNQWQQMKN 294

  Fly   250 SAFRPVITDQYQSKSVVELKPPVFGGSA 277
            ...|..::.||:..|.  ..||.:.|.:
Human   295 MENRHAMSSQYRMHSY--YPPPSYLGQS 320

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity