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Protein Alignment dmrt93B and LOC100359752
DIOPT Version :9
Sequence 1: | NP_524428.1 |
Gene: | dmrt93B / 42494 |
FlyBaseID: | FBgn0038851 |
Length: | 325 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038953287.1 |
Gene: | LOC100359752 / 100359752 |
RGDID: | 2323488 |
Length: | 735 |
Species: | Rattus norvegicus |
Alignment Length: | 132 |
Identity: | 28/132 - (21%) |
Similarity: | 51/132 - (38%) |
Gaps: | 35/132 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 127 PSSPRAKREDDQVEKTISEVEQQHLKQREEEYSESPAVAQDLSAPR------------------- 172
|..|..||:.:||.|.:|.:.. ||:::..::|...:||:..|.:
Rat 477 PFIPVFKRKSEQVNKNVSALST--LKRKQSGFTEPTTLAQETGATQGGKPSLGAATRKRPNSNIR 539
Fly 173 --RDNVSQTAIDML----AQLFPQRKRSVLE-----LVLKRCDLDLIRAIENVSPTGKSSPVDVT 226
..|:||.....| .:.:.::|...|. :.|:.......|| |:.|.::|...|.
Rat 540 VLAGNLSQKGSKPLQEKGTEFYDRKKEQPLSDLRQTVHLREARPSCTRA---VTQTSRNSVAGVK 601
Fly 227 SN 228
:|
Rat 602 NN 603
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
dmrt93B | NP_524428.1 |
DM |
39..85 |
CDD:279137 |
|
CUE_DMA |
176..214 |
CDD:270553 |
8/46 (17%) |
LOC100359752 | XP_038953287.1 |
DUF4708 |
50..323 |
CDD:406292 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3815 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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