DRSC/TRiP Functional Genomics Resources

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Protein Alignment r-l and URA3

DIOPT Version :10

Sequence 1:NP_524427.1 Gene:r-l / 42493 FlyBaseID:FBgn0003257 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_010893.3 Gene:URA3 / 856692 SGDID:S000000747 Length:267 Species:Saccharomyces cerevisiae


Alignment Length:266 Identity:120/266 - (45%)
Similarity:163/266 - (61%) Gaps:10/266 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 TKLTYENRANLAKSAVAKRLFNLIASKQTNLCLAADLTHADEILDVADKCGPYICLLKTHVDIVE 294
            :|.||:.||....|.||.:|||::..||||||.:.|:....|:|::.:..||.||||||||||:.
Yeast     2 SKATYKERAATHPSPVAAKLFNIMHEKQTNLCASLDVRTTKELLELVEALGPKICLLKTHVDILT 66

  Fly   295 DFS-DKFIADLQALAQRHNFLLMEDRKFADIGNTVSLQYGKGIYKISSWADLVTAHTLPGRSILQ 358
            ||| :..:..|:||:.::||||.||||||||||||.|||..|:|:|:.|||:..||.:.|..|:.
Yeast    67 DFSMEGTVKPLKALSAKYNFLLFEDRKFADIGNTVKLQYSAGVYRIAEWADITNAHGVVGPGIVS 131

  Fly   359 GLKAGLGEGGAGKE-RGVFLLAEMSASGNLIDAKYKENSNKIATEGADVDFVAGVVCQSSDAFAF 422
            |||....|  ..|| ||:.:|||:|..|:|...:|.:.:..||.  :|.|||.|.:.|.......
Yeast   132 GLKQAAEE--VTKEPRGLLMLAELSCKGSLATGEYTKGTVDIAK--SDKDFVIGFIAQRDMGGRD 192

  Fly   423 PGL--LQLTPGVKIDEGVDQLGQQYQSPEHVVKERGADIGVVGRGIL-KASSPKQAAQTYRDRLW 484
            .|.  |.:||||.:|:..|.|||||::.:.|| ..|:||.:||||:. |....|...:.||...|
Yeast   193 EGYDWLIMTPGVGLDDKGDALGQQYRTVDDVV-STGSDIIIVGRGLFAKGRDAKVEGERYRKAGW 256

  Fly   485 AAYQDR 490
            .||..|
Yeast   257 EAYLRR 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
r-lNP_524427.1 PyrE 6..203 CDD:440229
OMPdecase 258..479 CDD:395160 101/225 (45%)
URA3NP_010893.3 TIM-like beta/alpha barrel domains 32..252 CDD:473867 99/224 (44%)
Blue background indicates that the domain is not in the aligned region.

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