DRSC/TRiP Functional Genomics Resources

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Protein Alignment r-l and umps

DIOPT Version :10

Sequence 1:NP_524427.1 Gene:r-l / 42493 FlyBaseID:FBgn0003257 Length:493 Species:Drosophila melanogaster
Sequence 2:NP_956468.2 Gene:umps / 393143 ZFINID:ZDB-GENE-040426-785 Length:479 Species:Danio rerio


Alignment Length:490 Identity:232/490 - (47%)
Similarity:323/490 - (65%) Gaps:29/490 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ALALKLFEINAFKFGDFKMKVGINSPVYFDLRVIVSYPDVMQTVSDLLVEHIKDKQLSAKHVCGV 75
            :|.|||.:|.|.|||.||:|.|::||:|||||||||:|.:|..|:|||.:..::..:....||||
Zfish     8 SLILKLHDIQAVKFGTFKLKSGLSSPIYFDLRVIVSHPALMNQVADLLHKKSEEAGVQFDSVCGV 72

  Fly    76 PYTALPLATIVSVQQGTPMLVRRKEAKAYGTKKLVEGIFNAGDTCLIVEDVVTSGSSILDTVRDL 140
            ||||||||||:...:..|||:||||||.||||:|:||....||.|||||||||||||:|:|...|
Zfish    73 PYTALPLATIICSSKQYPMLIRRKEAKDYGTKRLIEGTIRPGDRCLIVEDVVTSGSSVLETAEVL 137

  Fly   141 QGEGIVVTDAVVVVDREQGGVANIAKHGVRMHSLFTLSFLLNTLHEAGRIEKSTVEAVAKYIAAV 205
            :.||:.:|||||::||||||...:|..|:.:||:.::|.||..|.:||||:..|.::|.::    
Zfish   138 EKEGLKITDAVVLMDREQGGSTRLADSGITLHSVISISRLLEVLLKAGRIDTDTAQSVKRF---- 198

  Fly   206 QINSDGTFVGGDKGDVVRANDLQRTK-----LTYENRANLAKS-AVAKRLFNLIASKQTNLCLAA 264
             :..:.|:       :::.|.....|     |:|..||.|..: .:|.||..::..|:||||::|
Zfish   199 -VQDNNTY-------ILKKNGSSAAKKSCGELSYGARAGLPDTHPLAARLMQIMEDKKTNLCVSA 255

  Fly   265 DLTHADEILDVADKCGPYICLLKTHVDIVEDFSDKFIADLQALAQRHNFLLMEDRKFADIGNTVS 329
            |:||:.|:||:|...||.||:|||||||:|||:....::|:.||::||||:.||||||||||||.
Zfish   256 DVTHSKELLDIAVTLGPLICVLKTHVDILEDFTADVASNLKELAKKHNFLIFEDRKFADIGNTVK 320

  Fly   330 LQYGKGIYKISSWADLVTAHTLPGRSILQGLKAGLGEGGAGKE--RGVFLLAEMSASGNLIDAKY 392
            .||..|:|:|||||.::.||.|||..:||||      ||.|..  .|..|:|:||:.|:|....|
Zfish   321 HQYEGGLYRISSWAHIINAHALPGPGVLQGL------GGVGNPLGHGCLLIAQMSSQGSLATGDY 379

  Fly   393 KENSNKIATEGADVDFVAGVVCQSSDAFAFPGLLQLTPGVKIDEGVDQLGQQYQSPEHVVKERGA 457
            .:...|:|.:.:  |||.|.: ..|.....||::.:||||::..|.|.|||||.|||.|:..:|:
Zfish   380 TQAVVKMAEDHS--DFVFGFI-SGSKISEKPGMVHMTPGVQMQTGGDGLGQQYSSPEDVICTKGS 441

  Fly   458 DIGVVGRGILKASSPKQAAQTYRDRLWAAYQDRVA 492
            ||.:||||||.:....:||..||...|.||..|::
Zfish   442 DIIIVGRGILGSPDRLRAAGEYRTAGWEAYLKRLS 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
r-lNP_524427.1 PyrE 6..203 CDD:440229 105/191 (55%)
OMPdecase 258..479 CDD:395160 109/222 (49%)
umpsNP_956468.2 PyrE 9..201 CDD:440229 105/196 (54%)
OMPdecase 249..463 CDD:395160 109/222 (49%)

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