DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cortactin and Abi3

DIOPT Version :10

Sequence 1:NP_524426.2 Gene:Cortactin / 42491 FlyBaseID:FBgn0025865 Length:559 Species:Drosophila melanogaster
Sequence 2:XP_017170196.1 Gene:Abi3 / 66610 MGIID:1913860 Length:383 Species:Mus musculus


Alignment Length:255 Identity:71/255 - (27%)
Similarity:98/255 - (38%) Gaps:60/255 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   307 QTGRTGGIGNAISAFNQMQSPVSET---PPARKEPIIIPKAQPVKIELEAKEEPTASTTSAAVAP 368
            |..|||.:..  .:.....:|||.|   ||...||:.:|.....|:...:.....||..||..| 
Mouse   178 QLSRTGTLSR--KSIKAPATPVSATLGRPPRIPEPVQLPAVPDGKLSAASSASSLASAGSAEGA- 239

  Fly   369 TPTVVPAREPETAPVAKAAAPPPDVVPQIEVETVDTPPRSEPQSPVYVPTP-----QPEVHAQVQ 428
              :.:|..:.:.||   |..|||.|.|.       |||.....:.|::|.|     ||.:.|::.
Mouse   240 --SGIPQSKGQVAP---ATPPPPPVAPV-------TPPPPPLSAEVFLPPPPLEVSQPPLEAELP 292

  Fly   429 VQPEPQPQADPEPVVEEEPLYQNQAEIKAASPLPPTNGTVSEAVAPSGTATVPEEAIYANSDNLA 493
            :.|.|..:.|               |:....|.||..|       |...:.||           |
Mouse   293 LPPPPALEGD---------------ELGLLPPPPPGFG-------PDEPSWVP-----------A 324

  Fly   494 DYLEDTGIHAIALYDYQAADDDEISFDPDDVITHIEKIDDGWWRGLCKNRYGLFPANYVQ 553
            .|||    ..:.||.|....|:|:||....||....:..|||..|:.....|.||.|||:
Mouse   325 SYLE----KVVTLYPYTRQKDNELSFSEGTVICVTRRYSDGWCEGVSSEGTGFFPGNYVE 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CortactinNP_524426.2 HS1_rep 84..119 CDD:460497
HS1_rep 121..156 CDD:460497
HS1_rep 158..193 CDD:460497
HS1_rep 195..230 CDD:460497
rne <327..489 CDD:236766 44/169 (26%)
SH3_Cortactin 502..554 CDD:212892 19/52 (37%)
Abi3XP_017170196.1 Abi_HHR 112..175 CDD:462279
SH3_Abi 329..380 CDD:212760 18/50 (36%)
Blue background indicates that the domain is not in the aligned region.

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