DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cortactin and Abp1

DIOPT Version :10

Sequence 1:NP_524426.2 Gene:Cortactin / 42491 FlyBaseID:FBgn0025865 Length:559 Species:Drosophila melanogaster
Sequence 2:XP_001689246.2 Gene:Abp1 / 5667958 VectorBaseID:AGAMI1_005424 Length:432 Species:Anopheles gambiae


Alignment Length:525 Identity:136/525 - (25%)
Similarity:196/525 - (37%) Gaps:175/525 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 YGYGGKFGVEKDRMDKSAVGHD---------YQGKVGKHASQKDYSDGFGGKF--------GVQE 130
            :||.|:..|.|    ....|.|         ..||:.....:.|.|:....||        |...
Mosquito    31 FGYEGQTNVLK----VQETGEDGISELAAELNSGKIQYAFLRVDNSETGIAKFVFINWQGEGAPI 91

  Fly   131 DRKD------KSAVGWDHVEKVEKHASQKDYATGFGGKFGVQSDRVDKSAVGWDHIEKVEK---- 185
            .||.      :...|..|...:..||:.:|         .|:..|:         :||::|    
Mosquito    92 ARKGTCAKHVRDVTGLLHGAHITVHATNED---------DVEEARI---------LEKLQKVVVN 138

  Fly   186 HESQKDYS------KGFGGKFGVQEDRKDKSAVG----WDHKEAPQKHASQVDHKVKPVIEGAKP 240
            ....||||      |..|..:......|:.:...    |..:|..:||                 
Mosquito   139 DFKVKDYSQAIDSPKPVGTNYSRVNPTKEINPAERDEFWRKEEEEEKH----------------- 186

  Fly   241 SNLRAKFENLAKNSEEESRKRAEEQKRLREAKDKRDREEAAKKTVAENTPRTSTEAPPPKGSRAA 305
             .|:|::|.....:     ...||::|.||.::...||.||  |.|.:....|..:|....:|.|
Mosquito   187 -RLQAEYERKLNET-----VLLEEERRKREEREFEKREGAA--TAAASVSSASPVSPDRSYARQA 243

  Fly   306 ---IQTGRTGGIGNAISAFNQMQSPVSETPPARKEPIIIPKAQ--PVKIELEAKEEPTASTTSAA 365
               .:|.|...|...:.|..::.|        .|...:...||  |..|:.|..:|.|       
Mosquito   244 SDQSKTEREREIKQVVEASAKVSS--------AKARFLNSTAQLSPTHIQAEVAQELT------- 293

  Fly   366 VAPTPTVVPAREPETAPVAKAAAPPPDVVPQIEVET-------VDTPP--RSEPQSPVYVPTPQP 421
                       ||..:|.  |:.....::.:::.|.       .||||  .:|.:.||       
Mosquito   294 -----------EPPFSPT--ASFEERSIINELKAELESERQNGTDTPPALAAEEEPPV------- 338

  Fly   422 EVHAQVQVQPEPQPQADPEPVVEEEPLYQNQAEIKAASPLPPTNGTVSEAVAPSGTATVPEEAIY 486
                 |.| |..:|...||.|          .|:.|.....| |.|:                  
Mosquito   339 -----VMV-PAGEPVLSPEEV----------PEVAAGQYFDP-NATI------------------ 368

  Fly   487 ANSDNLADYLEDTGIHAIALYDYQAADDDEISFDPDDVITHIEKIDDGWWRGLCKN-RYGLFPAN 550
                :|:|  ||..|.|.||||||||||.||||||||:||||::||:|||:||..: .|||||||
Mosquito   369 ----DLSD--EDNMIRARALYDYQAADDSEISFDPDDIITHIDQIDEGWWQGLAPDGTYGLFPAN 427

  Fly   551 YVQVV 555
            ||:::
Mosquito   428 YVELI 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CortactinNP_524426.2 HS1_rep 84..119 CDD:460497 10/43 (23%)
HS1_rep 121..156 CDD:460497 10/48 (21%)
HS1_rep 158..193 CDD:460497 7/38 (18%)
HS1_rep 195..230 CDD:460497 6/38 (16%)
rne <327..489 CDD:236766 32/172 (19%)
SH3_Cortactin 502..554 CDD:212892 39/52 (75%)
Abp1XP_001689246.2 None

Return to query results.
Submit another query.