DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cortactin and dbn1

DIOPT Version :9

Sequence 1:NP_001247222.1 Gene:Cortactin / 42491 FlyBaseID:FBgn0025865 Length:559 Species:Drosophila melanogaster
Sequence 2:XP_009293890.1 Gene:dbn1 / 561153 ZFINID:ZDB-GENE-091204-284 Length:590 Species:Danio rerio


Alignment Length:489 Identity:91/489 - (18%)
Similarity:164/489 - (33%) Gaps:148/489 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 KDRMDKSAVGHDYQGKVGKHASQKDYSDGFGGKFGVQEDRKDKSAVGWDHVEKVEKHASQKDYAT 157
            ||..:...||..||....:...:|...:.|                 |:..::.|:...:::...
Zfish   155 KDEENGEHVGTTYQKTNAEIEMKKINREEF-----------------WEQAKREEETRKEEERRK 202

  Fly   158 GFGGKFGVQSDRVDKSAVGWDHIEKVEKHESQKDYSKGFGGKFGVQEDRKDKSAVGWDHKEAPQK 222
            ....:...:::|::        :|:.|:.|.:|.|.:   .:..::|.||..    .:.:||.::
Zfish   203 AAEERQRFENERME--------LERKEQEEREKRYRE---REQQIEEHRKKI----LEEEEAKER 252

  Fly   223 HASQVDHKVKPVIEGAKPSNLRAKFENLAKNSEEESRKRAEEQKRLREAKDKRDREEAAKKTVAE 287
            ..:|      |:|...:||......|......||.:...|:.....||...:|:|..|       
Zfish   253 TRNQ------PLIVRTEPSCEDPSLEKKESEVEEAAAIIAQRPSNPREFFKQRERAIA------- 304

  Fly   288 NTPRTSTEAPPPKGSRAAIQTGRTGGIGNAISAFNQMQSP------VSETPP-ARKEP------- 338
                .|.:..|       :.|.|||.:.:..  ..|..||      .|.||| :|::|       
Zfish   305 ----NSVDISP-------VMTHRTGRLDSPF--LRQQHSPSDCSPSPSRTPPLSRRQPGPPDDFD 356

  Fly   339 -----------------III----------------PKAQPVKIELEAKEEPTASTTSAAVAPTP 370
                             |.|                ||..||:.....|..|:.|...::|||  
Zfish   357 EGILERSMTTGCTPIPRIAIQEEKDDFFRKEFGFDSPKQTPVQESGFTKASPSISPQPSSVAP-- 419

  Fly   371 TVVPAREPETAPVAKAAAPPPDVVPQIEVETVDTPPRSEPQSPVYVPTPQPEVHAQVQVQP---- 431
              :|:.:.....:..:...|...:.|.....:|          :...||:|........||    
Zfish   420 --LPSTDESLLDLWDSGPAPAIALSQASTHIMD----------LMEDTPEPHPAGSSPAQPLLSF 472

  Fly   432 EPQPQADPEPVVEEEPLYQNQAEIKAASP----------LPPTNGTVSEAVAPSGTATVPEEAIY 486
            :..|.|...|..|::|    .:.:..|.|          |...:|:.|:.:...       :.:.
Zfish   473 DEVPDAPYCPGTEDDP----SSLVDVAGPHQMTLSYQQALQHASGSDSQDMDDG-------QLLL 526

  Fly   487 ANSDNLADYLEDTGIHAIALYDYQAADDDEISFD 520
            .|.|.|   |:: |..|...|..|:.::|.:..|
Zfish   527 TNGDTL---LKE-GTQASEGYFSQSQEEDFVQSD 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CortactinNP_001247222.1 HS1_rep 84..119 CDD:396686 7/25 (28%)
HS1_rep 121..156 CDD:396686 3/34 (9%)
HS1_rep 158..193 CDD:396686 5/34 (15%)
HS1_rep 195..229 CDD:396686 6/33 (18%)
rne <327..489 CDD:236766 38/222 (17%)
SH3_Cortactin 502..554 CDD:212892 5/19 (26%)
dbn1XP_009293890.1 ADF_drebrin_like 3..141 CDD:200437
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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