DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cortactin and dbnlb

DIOPT Version :9

Sequence 1:NP_001247222.1 Gene:Cortactin / 42491 FlyBaseID:FBgn0025865 Length:559 Species:Drosophila melanogaster
Sequence 2:XP_005167394.1 Gene:dbnlb / 553729 ZFINID:ZDB-GENE-050522-293 Length:476 Species:Danio rerio


Alignment Length:580 Identity:140/580 - (24%)
Similarity:222/580 - (38%) Gaps:175/580 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 NDV--SEQEQRWGSKTIDGSG---RTA--GTIDMDKLREETEQADLDKKKQLLKDQNAG------ 82
            |:|  .:.|..|...|.:|:.   |.|  |...::::.||.....:......:||.|:|      
Zfish    17 NEVVGEKSETNWVLFTYEGNTNDIRLAEKGDGGLEEMVEELNSGKVMYGFCRVKDPNSGLPKYVL 81

  Fly    83 YGYGGKFGVEKDRMDKSAVGHDYQGKVGKH-ASQKDYSDGFGGKFGVQ-EDRKDKSAVGWDHVEK 145
            ..:.|: ||:..|          :|:...| :|..::..|.......: |:..:..||    :||
Zfish    82 INWTGE-GVKDAR----------KGQCANHVSSMANFLKGAHVTINARAEEDVEPDAV----MEK 131

  Fly   146 VEKHASQKDYATGFGGKFGVQSDRVDKSA----VG--------------------WDHIEKVEKH 186
            |.|       |:|....|..::.|...|.    ||                    |...||.|:.
Zfish   132 VAK-------ASGANYSFHKETSRFRDSGPQGPVGSVYQKTNAMSEIKKTNKDTFWAQAEKDEEK 189

  Fly   187 ESQKDYSKGFGGKFGVQEDRKDKSAVGWDHKEA------PQKHASQVDHKVKPVIEGAKPSNLRA 245
            ..|::..:....:..::::|||:     :.|||      .::.|||:|                 
Zfish   190 RLQEEKRRAVDERQQLEKERKDR-----EMKEAELRDKKTKERASQID----------------- 232

  Fly   246 KFENLAKNSEEESRKRAEEQKRLREAKDKRDREEAAKKTVAENTPRTSTEAPPPKGSRAAIQTGR 310
                       |.||..::|.....|:.|:..||..||..|:..|....|:.......||:.:.|
Zfish   233 -----------EQRKYQQKQDVDNRAQQKQLEEEEEKKQAAQQKPFYRGESVEKANEAAALVSQR 286

  Fly   311 TGGIGNAISAFNQMQSPVSETPPARKEPIIIPKAQPVKIELEAKEEPTASTTSAAVAPTPTVVPA 375
            :   .|....|.|.:..::                |...:...:..|.....::......:..| 
Zfish   287 S---VNPREMFKQREMGIN----------------PTNTDSNTQSSPKPGRLNSPFLSKQSCDP- 331

  Fly   376 REPETAPVAKAAAPPPDVVPQIEVETVDTPPRSEPQSPVYVPTPQPEVHAQ---VQV------QP 431
             ||..:|| :.|:|....|...|.:     |||:     ||.. :.|..|:   |||      .|
Zfish   332 -EPFRSPV-RQASPLRAAVASFEEQ-----PRSQ-----YVEA-EAEAEAEYEDVQVVSDKYEAP 383

  Fly   432 EPQPQADPEPVVEEEPLYQNQAEIKAASPLPPTNGTVSEAVAPSGTATVPEEAIYANSDNLADYL 496
            ..|.|...|.|.|.:.:|:|..:::..|...|                                :
Zfish   384 VEQQQPQYEAVEEPDAVYENPTQVEEQSTYEP--------------------------------V 416

  Fly   497 EDTGIHAIALYDYQAADDDEISFDPDDVITHIEKIDDGWWRGLCKN-RYGLFPANYVQVV 555
            ::.|:.|.||||||||||.||||||||:||.||.||:|||||...: .:|:||||||:::
Zfish   417 DERGVCARALYDYQAADDTEISFDPDDIITSIEMIDEGWWRGYGPDGHFGMFPANYVELL 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CortactinNP_001247222.1 HS1_rep 84..119 CDD:396686 7/35 (20%)
HS1_rep 121..156 CDD:396686 8/35 (23%)
HS1_rep 158..193 CDD:396686 11/58 (19%)
HS1_rep 195..229 CDD:396686 9/39 (23%)
rne <327..489 CDD:236766 31/170 (18%)
SH3_Cortactin 502..554 CDD:212892 37/52 (71%)
dbnlbXP_005167394.1 ADF_drebrin_like 3..138 CDD:200437 31/142 (22%)
RILP-like 182..>243 CDD:304877 18/93 (19%)
SH3_Abp1_eu 422..475 CDD:212893 37/52 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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