DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cortactin and ABI3

DIOPT Version :10

Sequence 1:NP_524426.2 Gene:Cortactin / 42491 FlyBaseID:FBgn0025865 Length:559 Species:Drosophila melanogaster
Sequence 2:XP_005257486.1 Gene:ABI3 / 51225 HGNCID:29859 Length:373 Species:Homo sapiens


Alignment Length:345 Identity:89/345 - (25%)
Similarity:116/345 - (33%) Gaps:78/345 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 IEGAKPSNLRAKFENLAKNSEEESRKRAEEQKRLREAKDKRDREEAAKKTVAENTPRTSTEAP-- 297
            ::||....:.|:...|.:.......|.|.             ||.....||....|.....||  
Human    78 LQGAALRQVEARVSTLGQMVNMHMEKVAR-------------REIGTLATVQRLPPGQKVIAPEN 129

  Fly   298 -PP--KGSRAAIQTGRTGGIGNAISAFNQMQS---------------PVSET---PPARKEPIII 341
             ||  ...|..:..|....||:.|...:...|               |.|.|   ||...||:.:
Human   130 LPPLTPYCRRPLNFGCLDDIGHGIKDLSTQLSRTGTLSRKSIKAPATPASATLGRPPRIPEPVHL 194

  Fly   342 PKAQPVKIELEAKEEPTASTTSA---AVAPTPTVVPAREPETAPVAKAAAPPPDVVPQIEVETVD 403
            |.....::...:.....||..||   ..||||....|  |...|:..:..|||   |...||...
Human   195 PVVPDGRLSAASSAFSLASAGSAEGVGGAPTPKGQAA--PPAPPLPSSLDPPP---PPAAVEVFQ 254

  Fly   404 TPPRSEPQSPVYVPTPQPEVHAQVQVQPEPQPQADPEPVVEEEPLYQNQAEIKAASPLPPTNGTV 468
            .||..|..||   |.|...:..|.:..|.|.....|.|:..:|         ....|.||..|  
Human   255 RPPTLEELSP---PPPAFLLFPQDEELPLPLDLPPPPPLDGDE---------LGLPPPPPGFG-- 305

  Fly   469 SEAVAPSGTATVPEEAIYANSDNLADYLEDTGIHAIALYDYQAADDDEISFDPDDVITHIEKIDD 533
                 |...:.||           |.|||    ..:.||.|.:..|:|:||....||....:..|
Human   306 -----PDEPSWVP-----------ASYLE----KVVTLYPYTSQKDNELSFSEGTVICVTRRYSD 350

  Fly   534 GWWRGLCKNRYGLFPANYVQ 553
            ||..|:.....|.||.|||:
Human   351 GWCEGVSSEGTGFFPGNYVE 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CortactinNP_524426.2 HS1_rep 84..119 CDD:460497
HS1_rep 121..156 CDD:460497
HS1_rep 158..193 CDD:460497
HS1_rep 195..230 CDD:460497
rne <327..489 CDD:236766 45/167 (27%)
SH3_Cortactin 502..554 CDD:212892 19/52 (37%)
ABI3XP_005257486.1 Abi_HHR 93..156 CDD:462279 17/75 (23%)
SH3_Abi 319..370 CDD:212760 18/50 (36%)
Blue background indicates that the domain is not in the aligned region.

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