DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cortactin and abi1a

DIOPT Version :10

Sequence 1:NP_524426.2 Gene:Cortactin / 42491 FlyBaseID:FBgn0025865 Length:559 Species:Drosophila melanogaster
Sequence 2:XP_009295502.1 Gene:abi1a / 393711 ZFINID:ZDB-GENE-040426-1701 Length:522 Species:Danio rerio


Alignment Length:536 Identity:115/536 - (21%)
Similarity:162/536 - (30%) Gaps:231/536 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 KVKPVIEGAKPSNLRA---KFENLAKNSE---------EESRKRAEEQK---------------- 266
            :::.::|...|:..||   .::||.:.::         ::.||..||.|                
Zfish     3 ELQMLLEEEIPAGKRALVESYQNLTRVADYCENNYVQAQDKRKALEETKAYTTQSLASVAYQINA 67

  Fly   267 --------------RLREA--------------KDKRDREEAAKKTVAENTPRT-STEAP----- 297
                          :||..              |:|..|.|....|..:||.|| ...||     
Zfish    68 LANNVLQLLDIQASQLRRMESSINHISQTVDIHKEKVARREIGILTTNKNTARTHKIIAPANVER 132

  Fly   298 PPKGSRAAIQTGRTGGIGNAISAFNQMQ---------SPVSETPPARKEPIIIPKA--------- 344
            |.:..|..|.......:|:.:......|         ..:|.|.|..::|...|.|         
Zfish   133 PVRYIRKPIDYNVLDDVGHGVKWLKAKQHGNNQSIRGGTLSRTNPPTQKPPSPPLAGRGTLGRNT 197

  Fly   345 -----QPVK------------IELEAKEEP--TAS------TTSAA------------------- 365
                 :|||            ..|.::..|  |||      |.|.:                   
Zfish   198 SYKTLEPVKPPTVPNDYMTSPARLGSQHSPGRTASLNQRPRTHSGSSGGSGSRENSGSSSIGIPI 262

  Fly   366 VAPTPTVVPAREPETAPVAKAAAPPPDVVPQIEVETVDTPPRSEPQSPVYVPTP----------- 419
            ..|||::     |.:.|...:.||||...|       ..||...|...:..|.|           
Zfish   263 AVPTPSI-----PNSIPATPSWAPPPGAPP-------PAPPPPPPLPGLGPPMPAAAIAVAAGPG 315

  Fly   420 -------------------------------------QPEVHAQVQVQ----------------P 431
                                                 .|.|.:|..:|                |
Zfish   316 LGPIPMSQFGTISRQVSRHNSSNSSVSMVSATGTYRRAPSVSSQFSLQQPHINGGTPAMSMAPPP 380

  Fly   432 EPQPQADPE-PV------VEEEPLYQNQAEIKAASPLPPTNGTVSEAVAPSGTATVP------EE 483
            .|.||..|: |:      |:|     |.|:.....|.||....|....||......|      |.
Zfish   381 PPMPQLTPQIPLTGFVARVQE-----NIADTPTPPPPPPPEDMVIFDEAPPPPPPPPADYEDEEA 440

  Fly   484 AIYANSDNLAD---------YLEDTGIHAIALYDYQAADDDEISFDPDDVITHIEKIDDGWWRGL 539
            ||...||..||         |.|    ..:|:|||....|||:||....:|..|:|.||||:.|:
Zfish   441 AIVHYSDPYADGDPQWAPKSYAE----KVVAIYDYTKDKDDELSFIEGAIIYIIKKNDDGWFEGV 501

  Fly   540 CKNRYGLFPANYVQVV 555
            |....||||.|||:.:
Zfish   502 CNGVTGLFPGNYVESI 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CortactinNP_524426.2 HS1_rep 84..119 CDD:460497
HS1_rep 121..156 CDD:460497
HS1_rep 158..193 CDD:460497
HS1_rep 195..230 CDD:460497 115/536 (21%)
rne <327..489 CDD:236766 55/291 (19%)
SH3_Cortactin 502..554 CDD:212892 25/51 (49%)
abi1aXP_009295502.1 Abi_HHR 93..156 CDD:462279 15/62 (24%)
SH3_Abi1 464..522 CDD:212904 25/54 (46%)
Blue background indicates that the domain is not in the aligned region.

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