DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cortactin and HCLS1

DIOPT Version :9

Sequence 1:NP_001247222.1 Gene:Cortactin / 42491 FlyBaseID:FBgn0025865 Length:559 Species:Drosophila melanogaster
Sequence 2:NP_005326.3 Gene:HCLS1 / 3059 HGNCID:4844 Length:486 Species:Homo sapiens


Alignment Length:567 Identity:233/567 - (41%)
Similarity:332/567 - (58%) Gaps:94/567 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWKASAGHQIQATSAASAEDDDWETDPDFVNDVSEQEQRWGSKTIDGSGRTAGTIDMDKLREE-T 64
            |||:..||.:..  :...:.|||:||||||||:||:|||||:|||:|||||. .|::.:||.: :
Human     1 MWKSVVGHDVSV--SVETQGDDWDTDPDFVNDISEKEQRWGAKTIEGSGRTE-HINIHQLRNKVS 62

  Fly    65 EQADLDKKKQLLKDQNAGYGYGGKFGVEKDRMDKSAVGHDYQGKVGKHASQKDYSDGFGGKFGVQ 129
            |:.|:.:||::.....|.:||||:||||:||||||||||:|..:|.||:||.|.:.|||||:||:
Human    63 EEHDVLRKKEMESGPKASHGYGGRFGVERDRMDKSAVGHEYVAEVEKHSSQTDAAKGFGGKYGVE 127

  Fly   130 EDRKDKSAVGWDHVEKVEKHASQKDYATGFGGKFGVQSDRVDKSAVGWDHIEKVEKHESQKDYSK 194
            .||.||||||:|:..:||||.|||||:.||||::||:.|:.||:|:|:|:..:.||||||:||:|
Human   128 RDRADKSAVGFDYKGEVEKHTSQKDYSRGFGGRYGVEKDKWDKAALGYDYKGETEKHESQRDYAK 192

  Fly   195 GFGGKFGVQEDRKDKSAVGWDHKEAPQKHASQVDHKVKPVIEGAKPS--NLRAKFENLAKNSEEE 257
            ||||::|:|:||.||||||::..|||     ...:|....||.|...  .|:||||::|    ||
Human   193 GFGGQYGIQKDRVDKSAVGFNEMEAP-----TTAYKKTTPIEAASSGTRGLKAKFESMA----EE 248

  Fly   258 SRKRAEEQKRLREAKDKRDREEAAKKTVAENTPRTSTE-----APPPKGSRAAIQTGRTGGIGNA 317
            .|||.||:|..:.|:.:::|:...|::.....|..:.|     ||.||                .
Human   249 KRKREEEEKAQQVARRQQERKAVTKRSPEAPQPVIAMEEPAVPAPLPK----------------K 297

  Fly   318 ISAFNQMQSPVSETPPARKEPIIIPKAQPVKIELEAKEEPTASTTSAAVAPTPTVVPAREPETAP 382
            ||  ::...||...|.:..||:...:..||.:                       :|.|  :|.|
Human   298 IS--SEAWPPVGTPPSSESEPVRTSREHPVPL-----------------------LPIR--QTLP 335

  Fly   383 VAKAAAP--PPDVVPQIEVETVDTPPRSEPQSPVYVPTPQPEVHAQVQVQPEPQPQADPEPVVEE 445
            ......|  ||..:..::||          :.|||...|:||      .:|||:|:.|.|. |||
Human   336 EDNEEPPALPPRTLEGLQVE----------EEPVYEAEPEPE------PEPEPEPENDYED-VEE 383

  Fly   446 EPLYQNQAEIKA--ASPLPPTNGTVSEAVAPSGTATVPEEAIYANSDNLADYLEDTGIHAIALYD 508
            ...::.:.|.:.  ...|.|.:.:.|.|:|  |::..|..   |.:..:|     .||.|:|:||
Human   384 MDRHEQEDEPEGDYEEVLEPEDSSFSSALA--GSSGCPAG---AGAGAVA-----LGISAVAVYD 438

  Fly   509 YQAADDDEISFDPDDVITHIEKIDDGWWRGLCKNRYGLFPANYVQVV 555
            ||....||:|||||||||.||.:|:|||||.|...:||||||||:::
Human   439 YQGEGSDELSFDPDDVITDIEMVDEGWWRGRCHGHFGLFPANYVKLL 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CortactinNP_001247222.1 HS1_rep 84..119 CDD:396686 25/34 (74%)
HS1_rep 121..156 CDD:396686 24/34 (71%)
HS1_rep 158..193 CDD:396686 19/34 (56%)
HS1_rep 195..229 CDD:396686 17/33 (52%)
rne <327..489 CDD:236766 40/165 (24%)
SH3_Cortactin 502..554 CDD:212892 34/51 (67%)
HCLS1NP_005326.3 Involved in HAX-1 binding 27..66 23/39 (59%)
Cortactin 1 79..115 25/35 (71%)
HS1_rep 82..117 CDD:308050 25/34 (74%)
Cortactin 2 116..152 22/35 (63%)
HS1_rep 119..154 CDD:308050 24/34 (71%)
Cortactin 3 153..189 19/35 (54%)
HS1_rep 156..191 CDD:308050 19/34 (56%)
Cortactin 4, truncated 190..212 15/21 (71%)
HS1_rep 193..>218 CDD:308050 15/24 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 243..419 59/241 (24%)
GGN 259..>348 CDD:330621 25/131 (19%)
SH3_HS1 431..485 CDD:213006 35/53 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 82 1.000 Domainoid score I8435
eggNOG 1 0.900 - - E1_28JSJ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 391 1.000 Inparanoid score I2001
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1243441at2759
OrthoFinder 1 1.000 - - FOG0004044
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_105161
Panther 1 1.100 - - LDO PTHR10829
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5379
SonicParanoid 1 1.000 - - X2789
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1110.860

Return to query results.
Submit another query.