DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cortactin and abi3

DIOPT Version :10

Sequence 1:NP_524426.2 Gene:Cortactin / 42491 FlyBaseID:FBgn0025865 Length:559 Species:Drosophila melanogaster
Sequence 2:XP_031750684.1 Gene:abi3 / 100493650 XenbaseID:XB-GENE-953171 Length:337 Species:Xenopus tropicalis


Alignment Length:353 Identity:78/353 - (22%)
Similarity:127/353 - (35%) Gaps:116/353 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 RKDKSAVGWDHKEAPQKHASQVDHKVKPVIEGAKPSNLRAKFENLAKNSEEESRKRAEEQKRLRE 270
            |::.||    .:|||:....::     |....|    ||..:.||...::       ..:|...|
 Frog     5 RQENSA----EREAPRHSLGEI-----PAARQA----LRDSYTNLHNVAD-------YCEKNYME 49

  Fly   271 AKDKRDREEAAKKTVAENTPRTSTEAPPPKGSRAAIQTGRTGGIGNAISAFNQMQSPV------- 328
            |.||   ::|.:.|::..|...::.|            ...|.|...:....|.||.:       
 Frog    50 APDK---QKALQDTMSLVTQTLASVA------------SHVGLIAREMLLILQDQSQILLQHENR 99

  Fly   329 ---------SETPPARKEPI--------IIPKAQPVKIELEAKEEPTASTTSAAV--------AP 368
                     ..|....::.|        :|| ||  ||..|..:.|.::.|..::        ..
 Frog   100 VWYISQLVDIHTEKTTRQKIGSLTSRRKMIP-AQ--KILTEGNQAPRSAYTRNSINFKSLDKTGH 161

  Fly   369 TPTVVPAREPETAPV-----AKAAAPP------------PDVVPQI-EVETVDTPPRSEPQSPVY 415
            ..|...:|..:|..:     :|:...|            |.:.||| |:.:..|||.....||  
 Frog   162 GITESDSRLSKTGTMSRRVNSKSLTNPQCTLGRSLRIKDPILPPQIPEMTSPSTPPVWNNNSP-- 224

  Fly   416 VPTPQPEVHAQVQVQPEPQPQADPEPVVEEE--PLYQNQAEIKAA----SPLPPTNGTVSEAVA- 473
                    :....:...|.|   |.|.|.:|  ||:..:..:..:    |.|||..| :::||. 
 Frog   225 --------NCDTTIMDPPLP---PPPDVSKEFFPLHYGENHVSESNLEFSDLPPPLG-INDAVGF 277

  Fly   474 PSGTATVPEEAIYANSDNLADYLEDTGI 501
            ||     ||..: |:||.|.|:. |.|:
 Frog   278 PS-----PEVEV-ADSDALLDFC-DPGL 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CortactinNP_524426.2 HS1_rep 84..119 CDD:460497
HS1_rep 121..156 CDD:460497
HS1_rep 158..193 CDD:460497
HS1_rep 195..230 CDD:460497 6/23 (26%)
rne <327..489 CDD:236766 46/218 (21%)
SH3_Cortactin 502..554 CDD:212892 78/353 (22%)
abi3XP_031750684.1 Abi_HHR 103..166 CDD:462279 12/65 (18%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.