DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mvl and SMF1

DIOPT Version :9

Sequence 1:NP_001262795.1 Gene:Mvl / 42490 FlyBaseID:FBgn0011672 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_014519.1 Gene:SMF1 / 854027 SGDID:S000005482 Length:575 Species:Saccharomyces cerevisiae


Alignment Length:578 Identity:161/578 - (27%)
Similarity:262/578 - (45%) Gaps:115/578 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SNQLHHQQILNETTYLKPAAKQAYFSDEKVLIPDDDSTNVGFSFRKLWAFTGPGFLMSIAYLDPG 95
            |:..:|::   |.||:   :|:....|               .|.|...|.|||.::|:||:|||
Yeast    51 SSSSNHER---EDTYV---SKRQVMRD---------------IFAKYLKFIGPGLMVSVAYIDPG 94

  Fly    96 NIESDMQSGAAAKYKILWVLLWATVLGLLMQRLAARLGVVTGLHLAEMCYRQYKRLPRWILWIM- 159
            |..:.:.:||:.::.:|.::|.:..:.:.:|.|..:||.||||.|:..| |:|  ||||:.|.: 
Yeast    95 NYSTAVDAGASNQFSLLCIILLSNFIAIFLQCLCIKLGSVTGLDLSRAC-REY--LPRWLNWTLY 156

  Fly   160 --IEIAIIGSDMQEVIGTAIAIYLLSNKVVPLWGGVLITIVDTFTFLFLDKYGLRKLEF--LFGT 220
              .|.|:|.:|:.||||||||:.:|..  |||..||.||:||.|..:|..|.|...:.|  :|..
Yeast   157 FFAECAVIATDIAEVIGTAIALNILIK--VPLPAGVAITVVDVFLIMFTYKPGASSIRFIRIFEC 219

  Fly   221 LITIMAVS----FGYE--YIVSAPNQGEVLEGMFVPWCSNCNSNVLLQAVGVVGAVIMPHNLYLH 279
            .:.::.|.    |..|  ||..:.:..:|..| |||.....:.|.:..|:.::||.:|||:|:|.
Yeast   220 FVAVLVVGVCICFAIELAYIPKSTSVKQVFRG-FVPSAQMFDHNGIYTAISILGATVMPHSLFLG 283

  Fly   280 SALVKSRDID-------------------RRQTKKVSEANFYFFIEASVAL-------FVSFIIN 318
            ||||:.|.:|                   .:.|:::.|..::.:...:.|:       .|...|.
Yeast   284 SALVQPRLLDYDVKHGNYTVSEEQDKVKKSKSTEEIMEEKYFNYRPTNAAIKYCMKYSMVELSIT 348

  Fly   319 LFVVAVFAHGMYGKTNNDVVEVCKDKSMYEDAKMSFVDNVNGTAIIDADLYKGGLFLGCTFGAVA 383
            ||.:|:|.        |..:.|....::|           |......|||:.....|.......|
Yeast   349 LFTLALFV--------NCAILVVAGSTLY-----------NSPEADGADLFTIHELLSRNLAPAA 394

  Fly   384 MYIWGVGILAAGQSSTMTGTYAGQFSMEGFLNLQWPRWCRVLVTRCIAIIPTFCLAMFSKMEDLT 448
            ..|:.:.:|.:|||:.:..|.:||...||.:|.:...|.|.|.||||:|||...:::....|.|:
Yeast   395 GTIFMLALLLSGQSAGVVCTMSGQIVSEGHINWKLQPWQRRLATRCISIIPCLVISICIGREALS 459

  Fly   449 SMNDILNAVMSLQLPFAAIPTIAFTSCAAIMGEFV----------NGLGNKIVSILLTIVVIGVN 503
            ...:....|:|:.|||...|.|.||...:||...:          |...|...|....|...|.:
Yeast   460 KALNASQVVLSIVLPFLVAPLIFFTCKKSIMKTEITVDHTEEDSHNHQNNNDRSAGSVIEQDGSS 524

  Fly   504 LYFVVVQVENMEIKGG------------LLALVCIFAILYI-LFNLYLVIHMAACMGN 548
                     .|||:.|            ::.::.|...|:: |.|:|.::.:....|:
Yeast   525 ---------GMEIENGKDVKIVYMANNWIITVIAIIVWLFLSLLNVYAIVQLGMSHGD 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MvlNP_001262795.1 nramp 75..479 CDD:162246 136/440 (31%)
Nramp 97..486 CDD:279852 127/435 (29%)
SMF1NP_014519.1 nramp 74..490 CDD:162246 136/440 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 165 1.000 Domainoid score I821
eggNOG 1 0.900 - - E1_COG1914
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 194 1.000 Inparanoid score I890
Isobase 1 0.950 - 0 Normalized mean entropy S1387
OMA 1 1.010 - - QHG54724
OrthoFinder 1 1.000 - - FOG0000712
OrthoInspector 1 1.000 - - otm46851
orthoMCL 1 0.900 - - OOG6_100775
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2295
SonicParanoid 1 1.000 - - X461
TreeFam 1 0.960 - -
1312.710

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