DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mvl and NRAMP1

DIOPT Version :9

Sequence 1:NP_001262795.1 Gene:Mvl / 42490 FlyBaseID:FBgn0011672 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_001321606.1 Gene:NRAMP1 / 844422 AraportID:AT1G80830 Length:532 Species:Arabidopsis thaliana


Alignment Length:585 Identity:211/585 - (36%)
Similarity:320/585 - (54%) Gaps:77/585 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GPGGSSGASGGGSQRSNQLHHQQILNETTYLKPAAKQAYFSDEKVLIPDDDSTNVGFSFRKLW-- 78
            |.|.|...|..|..||                       ||:.. ||.:.||..:..|.:|.|  
plant     5 GSGRSQFISSSGGNRS-----------------------FSNSP-LIENSDSNQIIVSEKKSWKN 45

  Fly    79 --AFTGPGFLMSIAYLDPGNIESDMQSGAAAKYKILWVLLWATVLGLLMQRLAARLGVVTGLHLA 141
              |:.|||||:||||:||||.|:|:|:||..||::||::|.|:...|::|.|||.||||||.|||
plant    46 FFAYLGPGFLVSIAYIDPGNFETDLQAGAHYKYELLWIILVASCAALVIQSLAANLGVVTGKHLA 110

  Fly   142 EMCYRQYKRLPRWILWIMIEIAIIGSDMQEVIGTAIAIYLLSNKVVPLWGGVLITIVDTFTFLFL 206
            |.|..:|.::|.::||::.|||::..|:.||||||.|:.:|.:  :|:|.|||:|.:.|...|.|
plant   111 EQCRAEYSKVPNFMLWVVAEIAVVACDIPEVIGTAFALNMLFS--IPVWIGVLLTGLSTLILLAL 173

  Fly   207 DKYGLRKLEFLFGTLITIMAVSFGYEYIVSAPNQGEVLEGMFVPWCSNCNSNVLLQAVGVVGAVI 271
            .|||:||||||...|:..:|:.|..|...|.|:.||||.|:|||......:..|  |:.::||::
plant   174 QKYGVRKLEFLIAFLVFTIAICFFVELHYSKPDPGEVLHGLFVPQLKGNGATGL--AISLLGAMV 236

  Fly   272 MPHNLYLHSALVKSRDIDRRQTKKVSEANFYFFIEASVALFVSFIINLFVVAVFAHGMYGKTNND 336
            |||||:||||||.||.|. |....:.||..::.||:.:||.|:|:||:.|::|..          
plant   237 MPHNLFLHSALVLSRKIP-RSASGIKEACRFYLIESGLALMVAFLINVSVISVSG---------- 290

  Fly   337 VVEVCKDKSMYEDAKMSFVDNVNGTAIIDADLYKGGLFLGCTFGAVAMYIWGVGILAAGQSSTMT 401
              .||...::..:      |..|   ..|.||.|....|....|..:..::.:.:||:|||||:|
plant   291 --AVCNAPNLSPE------DRAN---CEDLDLNKASFLLRNVVGKWSSKLFAIALLASGQSSTIT 344

  Fly   402 GTYAGQFSMEGFLNLQWPRWCRVLVTRCIAIIPTFCLAMFSKMEDLTSMNDILNAVMSLQLPFAA 466
            ||||||:.|:|||:|:...|.|.|:|||:||||:..:|:.........:..|.:.::|.:||||.
plant   345 GTYAGQYVMQGFLDLRLEPWLRNLLTRCLAIIPSLIVALIGGSAGAGKLIIIASMILSFELPFAL 409

  Fly   467 IPTIAFTSCAAIMGEFVNGLGNKIVSILLTIVVIGVNLYFVVVQVENMEIKGGLLALVCIFA--- 528
            :|.:.||||...||..||.:....::.::..:::|:|:|::|.....:.|...:..::.:|.   
plant   410 VPLLKFTSCKTKMGSHVNPMAITALTWVIGGLIMGINIYYLVSSFIKLLIHSHMKLILVVFCGIL 474

  Fly   529 -----ILYILFNLYLVIHMAACMGNQRLMNSRWVQR-----FVLPSQNSFSIKNANSTYARIATS 583
                 .||:....|||..      ..|:..|..:.|     ..||.|:..:::    ...|::||
plant   475 GFAGIALYLAAIAYLVFR------KNRVATSLLISRDSQNVETLPRQDIVNMQ----LPCRVSTS 529

  Fly   584  583
            plant   530  529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MvlNP_001262795.1 nramp 75..479 CDD:162246 173/407 (43%)
Nramp 97..486 CDD:279852 161/388 (41%)
NRAMP1NP_001321606.1 PRK00701 41..454 CDD:234815 181/438 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1914
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54724
OrthoDB 1 1.010 - - D666470at2759
OrthoFinder 1 1.000 - - FOG0000712
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100775
Panther 1 1.100 - - O PTHR11706
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X461
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.790

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