DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mvl and NRAMP2

DIOPT Version :9

Sequence 1:NP_001262795.1 Gene:Mvl / 42490 FlyBaseID:FBgn0011672 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_175157.1 Gene:NRAMP2 / 841127 AraportID:AT1G47240 Length:530 Species:Arabidopsis thaliana


Alignment Length:546 Identity:243/546 - (44%)
Similarity:335/546 - (61%) Gaps:76/546 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 AKQAYFSDEKVLI-----PDDDSTN---VGFSFRKLWAFTGPGFLMSIAYLDPGNIESDMQSGAA 106
            ::.|:.::||:||     |||.:|.   ..||:||||.|||||||||||:|||||:|.|:|:||.
plant    33 SEAAFETNEKILIVDFESPDDPTTGDTPPPFSWRKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAI 97

  Fly   107 AKYKILWVLLWATVLGLLMQRLAARLGVVTGLHLAEMCYRQYKRLPRWILWIMIEIAIIGSDMQE 171
            |.|.:||:|:|||.:|||:|.|:||:||.||.||||:|..:|....|::||.|.|:|:||:|:||
plant    98 AGYSLLWLLMWATAMGLLIQMLSARVGVATGRHLAELCRDEYPTWARYVLWSMAELALIGADIQE 162

  Fly   172 VIGTAIAIYLLSNKVVPLWGGVLITIVDTFTFLFLDKYGLRKLEFLFGTLITIMAVSFGYEYIVS 236
            |||:||||.:||...:|||.||:||..|.|.||||:.||:||||.:|..||..|.:||.:.:..:
plant   163 VIGSAIAIQILSRGFLPLWAGVVITASDCFLFLFLENYGVRKLEAVFAVLIATMGLSFAWMFGET 227

  Fly   237 APNQGEVLEGMFVPWCSNCNSNVLLQAVGVVGAVIMPHNLYLHSALVKSRDIDRRQTKKVSEANF 301
            .|:..|::.|:.:|   ..:|..:.|||||||.||||||::||||||:||.||.::..:|.||..
plant   228 KPSGKELMIGILLP---RLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKIDPKRKSRVQEALN 289

  Fly   302 YFFIEASVALFVSFIINLFVVAVFAHGMYGKTNNDVVEVCKDKSMYEDAKMSFVDNVNGTAIIDA 366
            |:.||:|||||:||:|||||..|||.|.||                       .:..|...:::|
plant   290 YYLIESSVALFISFMINLFVTTVFAKGFYG-----------------------TEKANNIGLVNA 331

  Fly   367 DLYKGGLFLGCTFGA---VAMYIWGVGILAAGQSSTMTGTYAGQFSMEGFLNLQWPRWCRVLVTR 428
                 |.:|...||.   ..:||||:|:||||||||:||||||||.|.|||||:..:|.|.::||
plant   332 -----GQYLQEKFGGGLLPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRAVITR 391

  Fly   429 CIAIIPTFCLA-MFSKME-DLTSMNDILNAVMSLQLPFAAIPTIAFTSCAAIMGEFVNGLGNKIV 491
            ..||:||..:| :|:..| .|..:|:.||.:.|:|:|||.:|.:...|...|||:|      ||.
plant   392 SCAIVPTMIVAIVFNTSEASLDVLNEWLNVLQSVQIPFALLPLLTLVSKEEIMGDF------KIG 450

  Fly   492 SIL---------LTIVVIGVNL--YFVVVQVENMEIKGGLLAL-VCIFAILYILFNLYLVIHMAA 544
            .||         |.:::.|..|  :||      .|:.|.|..: ||::...||.|.:||:.|   
plant   451 PILQRIAWTVAALVMIINGYLLLDFFV------SEVDGFLFGVTVCVWTTAYIAFIVYLISH--- 506

  Fly   545 CMGNQRLMNSRWVQRFV-LPSQNSFS 569
                .....|.|....: ||.:.|.|
plant   507 ----SNFFPSPWSSSSIELPKRVSVS 528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MvlNP_001262795.1 nramp 75..479 CDD:162246 202/408 (50%)
Nramp 97..486 CDD:279852 186/393 (47%)
NRAMP2NP_175157.1 SLC5-6-like_sbd 66..444 CDD:294310 202/408 (50%)
Nramp 88..451 CDD:279852 188/399 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 360 1.000 Domainoid score I196
eggNOG 1 0.900 - - E1_COG1914
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 429 1.000 Inparanoid score I420
OMA 1 1.010 - - QHG54724
OrthoDB 1 1.010 - - D666470at2759
OrthoFinder 1 1.000 - - FOG0000712
OrthoInspector 1 1.000 - - otm2579
orthoMCL 1 0.900 - - OOG6_100775
Panther 1 1.100 - - LDO PTHR11706
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X461
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

Return to query results.
Submit another query.