DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mvl and NRAMP6

DIOPT Version :9

Sequence 1:NP_001262795.1 Gene:Mvl / 42490 FlyBaseID:FBgn0011672 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_173048.3 Gene:NRAMP6 / 838166 AraportID:AT1G15960 Length:527 Species:Arabidopsis thaliana


Alignment Length:560 Identity:203/560 - (36%)
Similarity:313/560 - (55%) Gaps:56/560 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 AAKQAYFSDEKV----LIPDDDSTNVGFSFRKLW----AFTGPGFLMSIAYLDPGNIESDMQSGA 105
            ||:.|..|:..:    ||.:.||..:....:|.|    ::.|||||:||||:||||.|:|:||||
plant     2 AAETASGSNRSISNSPLIENSDSNQILVPEKKSWKNFFSYLGPGFLVSIAYIDPGNFETDLQSGA 66

  Fly   106 AAKYKILWVLLWATVLGLLMQRLAARLGVVTGLHLAEMCYRQYKRLPRWILWIMIEIAIIGSDMQ 170
            ..||::||::|.|:...|::|.|||.||||||.||||.|..:|.::|.::||::.|||::..|:.
plant    67 QYKYELLWIILVASCAALVIQSLAANLGVVTGKHLAEHCRAEYSKVPNFMLWVVAEIAVVACDIP 131

  Fly   171 EVIGTAIAIYLLSNKVVPLWGGVLITIVDTFTFLFLDKYGLRKLEFLFGTLITIMAVSFGYEYIV 235
            ||||||.|:.:|.|  :|:|.|||:|.:.|...|.|.:||:||||||...|:..:|:.|..|...
plant   132 EVIGTAFALNMLFN--IPVWIGVLLTGLSTLILLALQQYGIRKLEFLIAFLVFTIALCFFVELHY 194

  Fly   236 SAPNQGEVLEGMFVPWCSNCNSNVLLQAVGVVGAVIMPHNLYLHSALVKSRDIDRRQTKKVSEAN 300
            |.|:..|||.|:|||......:..|  |:.::||::|||||:||||||.||.|.|..| .:.||.
plant   195 SKPDPKEVLYGLFVPQLKGNGATGL--AISLLGAMVMPHNLFLHSALVLSRKIPRSVT-GIKEAC 256

  Fly   301 FYFFIEASVALFVSFIINLFVVAVFAHGMYGKTNNDVVEVCKDKSMYEDAKMSFVDNVNGTAIID 365
            .|:.||:.:||.|:|:||:.|::|..            .||....:..:.:.|         ..|
plant   257 RYYLIESGLALMVAFLINVSVISVSG------------AVCNASDLSPEDRAS---------CQD 300

  Fly   366 ADLYKGGLFLGCTFGAVAMYIWGVGILAAGQSSTMTGTYAGQFSMEGFLNLQWPRWCRVLVTRCI 430
            .||.|....|....|..:..::.:.:||:|||||:|||||||:.|:|||:|:...|.|..:|||:
plant   301 LDLNKASFLLRNVVGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLRLEPWLRNFLTRCL 365

  Fly   431 AIIPTFCLAMFSKMEDLTSMNDILNAVMSLQLPFAAIPTIAFTSCAAIMGEFVNGLGNKIVSILL 495
            ||||:..:|:.........:..|.:.::|.:||||.:|.:.|||....||...|.|....|:.::
plant   366 AIIPSLIVALIGGSAGAGKLIIIASMILSFELPFALVPLLKFTSSKTKMGSHANSLVISSVTWII 430

  Fly   496 TIVVIGVNLYFVVVQVENMEIKG--GLLALVCIFAI------LYILFNLYLVIHMAACMGNQRLM 552
            ..:::|:|:|::|.....:.:..  .|:|:|.:..:      .|:....|||:..     |:...
plant   431 GGLIMGINIYYLVSSFIKLLLHSHMNLVAIVFLGVLGFSGIATYLAAISYLVLRK-----NRESS 490

  Fly   553 NSRWVQRFVLPSQNSFSIKNANSTYARIATSSDQEPEGLA 592
            ::.::         .||......|..|...::.|.|..:|
plant   491 STHFL---------DFSNSQTEETLPREDIANMQLPNRVA 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MvlNP_001262795.1 nramp 75..479 CDD:162246 171/407 (42%)
Nramp 97..486 CDD:279852 159/388 (41%)
NRAMP6NP_173048.3 PRK00701 24..446 CDD:234815 181/447 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1914
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54724
OrthoDB 1 1.010 - - D666470at2759
OrthoFinder 1 1.000 - - FOG0000712
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100775
Panther 1 1.100 - - O PTHR11706
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X461
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.790

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