DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mvl and NRAMP4

DIOPT Version :9

Sequence 1:NP_001262795.1 Gene:Mvl / 42490 FlyBaseID:FBgn0011672 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_201534.1 Gene:NRAMP4 / 836868 AraportID:AT5G67330 Length:512 Species:Arabidopsis thaliana


Alignment Length:572 Identity:248/572 - (43%)
Similarity:338/572 - (59%) Gaps:86/572 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LNETTYLKP---AAKQAYFSDEKVLI-----------PDDDSTNVGFSFRKLWAFTGPGFLMSIA 90
            ::||...:|   :.::||...|||||           .||...:..||::|||.|||||||||||
plant     1 MSETDRERPLLASEERAYEETEKVLIVGIDEEEDADYDDDPGNSPKFSWKKLWLFTGPGFLMSIA 65

  Fly    91 YLDPGNIESDMQSGAAAKYKILWVLLWATVLGLLMQRLAARLGVVTGLHLAEMCYRQYKRLPRWI 155
            :|||||:|||:|:||.|.|.::|:|:|||.:|||:|.|:|||||.||.||||:|..:|....|.:
plant    66 FLDPGNLESDLQAGAIAGYSLIWLLMWATAIGLLIQLLSARLGVATGRHLAELCREEYPTWARMV 130

  Fly   156 LWIMIEIAIIGSDMQEVIGTAIAIYLLSNKVVPLWGGVLITIVDTFTFLFLDKYGLRKLEFLFGT 220
            ||||.|||:||:|:|||||:||||.:|||.:||||.||:||.:|.|.||||:.||:||||.:|..
plant   131 LWIMAEIALIGADIQEVIGSAIAIKILSNGLVPLWAGVVITALDCFIFLFLENYGIRKLEAVFAI 195

  Fly   221 LITIMAVSFGYEYIVSAPNQGEVLEGMFVPWCSNCNSNVLLQAVGVVGAVIMPHNLYLHSALVKS 285
            ||..||::|.:.:..:.|:..|:|.|..||   ..:|..:.||||:||.:|||||::||||||:|
plant   196 LIATMALAFAWMFGQTKPSGTELLVGALVP---KLSSRTIKQAVGIVGCIIMPHNVFLHSALVQS 257

  Fly   286 RDIDRRQTKKVSEANFYFFIEASVALFVSFIINLFVVAVFAHGMYGKTNNDVVEVCKDKSMYEDA 350
            |::|.::..:|.||..|:.||::.||.||||||:||..|||...||....|.:.:.......:|.
plant   258 REVDPKKRFRVKEALKYYSIESTGALAVSFIINVFVTTVFAKSFYGTEIADTIGLANAGQYLQDK 322

  Fly   351 KMSFVDNVNGTAIIDADLYKGGLFLGCTFGAVAMYIWGVGILAAGQSSTMTGTYAGQFSMEGFLN 415
                              |.||.|       ..:|||.:|:||||||||:||||||||.|.||||
plant   323 ------------------YGGGFF-------PILYIWAIGVLAAGQSSTITGTYAGQFIMGGFLN 362

  Fly   416 LQWPRWCRVLVTRCIAIIPTFCLAMFSKMED--LTSMNDILNAVMSLQLPFAAIPTIAFTSCAAI 478
            |:..:|.|.|:||..|||||..:|:.....|  |..:|:.||.:.|:|:|||.||.:...|...|
plant   363 LKMKKWVRALITRSCAIIPTMIVALVFDSSDSMLDELNEWLNVLQSVQIPFAVIPLLCLVSNEQI 427

  Fly   479 MGEFVNGLGNKIVSILLTI------VVIGVNLYFVVVQVENMEIKGGLLALVCIFAILYILFNLY 537
            ||.|      ||..::.||      :||.:|.|.:|...........||..|.||||.|::|.||
plant   428 MGSF------KIQPLVQTISWIVAALVIAINGYLMVDFFSGAATNLILLVPVIIFAIAYVVFVLY 486

  Fly   538 LVIHMAACMGNQRLMNSRWVQRFVLPSQNSFSIKNANSTYARIATSSDQEPE 589
            |:        ::.|..:.|                      ::..||.:||:
plant   487 LI--------SRGLTYTPW----------------------QLVASSHKEPQ 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MvlNP_001262795.1 nramp 75..479 CDD:162246 203/405 (50%)
Nramp 97..486 CDD:279852 188/390 (48%)
NRAMP4NP_201534.1 SLC5-6-like_sbd 50..428 CDD:382020 203/405 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 360 1.000 Domainoid score I196
eggNOG 1 0.900 - - E1_COG1914
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 429 1.000 Inparanoid score I420
OMA 1 1.010 - - QHG54724
OrthoDB 1 1.010 - - D666470at2759
OrthoFinder 1 1.000 - - FOG0000712
OrthoInspector 1 1.000 - - otm2579
orthoMCL 1 0.900 - - OOG6_100775
Panther 1 1.100 - - O PTHR11706
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X461
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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