DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mvl and NRAMP3

DIOPT Version :10

Sequence 1:NP_001262795.1 Gene:Mvl / 42490 FlyBaseID:FBgn0011672 Length:639 Species:Drosophila melanogaster
Sequence 2:NP_179896.1 Gene:NRAMP3 / 816847 AraportID:AT2G23150 Length:509 Species:Arabidopsis thaliana


Alignment Length:528 Identity:243/528 - (46%)
Similarity:332/528 - (62%) Gaps:59/528 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 QLHHQQ--ILNETTYLKPAAKQAYFSDEKVLI-----PDDDSTNVG------FSFRKLWAFTGPG 84
            ||.:.:  ::||    :...:.||...|||.|     .||....||      ||::|||.|||||
plant     3 QLENNEPLLINE----EEEEETAYDETEKVHIVRNEEEDDLEHGVGCGGAPPFSWKKLWLFTGPG 63

  Fly    85 FLMSIAYLDPGNIESDMQSGAAAKYKILWVLLWATVLGLLMQRLAARLGVVTGLHLAEMCYRQYK 149
            ||||||:|||||:|.|:|:||.|.|.:||:|:|||.:|||:|.|:|||||.||.||||:|..:|.
plant    64 FLMSIAFLDPGNLEGDLQAGAVAGYSLLWLLMWATAMGLLVQLLSARLGVATGRHLAELCRDEYP 128

  Fly   150 RLPRWILWIMIEIAIIGSDMQEVIGTAIAIYLLSNKVVPLWGGVLITIVDTFTFLFLDKYGLRKL 214
            ...|.:||:|.|:|:||||:|||||:||||.:|||.::|||.||:||.:|.|.||||:.||:|||
plant   129 TWARMVLWVMAELALIGSDIQEVIGSAIAIKILSNGILPLWAGVVITALDCFVFLFLENYGIRKL 193

  Fly   215 EFLFGTLITIMAVSFGYEYIVSAPNQGEVLEGMFVPWCSNCNSNVLLQAVGVVGAVIMPHNLYLH 279
            |.:|..||..|.|||.:.:..:.|:..|:|.|:.||   ..:|..:.:||||||.:|||||::||
plant   194 EAVFAVLIATMGVSFAWMFGQAKPSGSELLIGILVP---KLSSRTIQKAVGVVGCIIMPHNVFLH 255

  Fly   280 SALVKSRDIDRRQTKKVSEANFYFFIEASVALFVSFIINLFVVAVFAHGMYGKTNNDVVEVCKDK 344
            ||||:||::|:||..:|.||..|:.||:::|||:||:|||||..|||.|.|   |.|:       
plant   256 SALVQSREVDKRQKYRVQEALNYYTIESTIALFISFLINLFVTTVFAKGFY---NTDL------- 310

  Fly   345 SMYEDAKMSFVDNVNGTAIIDA-----DLYKGGLFLGCTFGAVAMYIWGVGILAAGQSSTMTGTY 404
                         .|...:::|     :.|.||:|       ..:|||.:|:||||||||:||||
plant   311 -------------ANSIGLVNAGQYLQEKYGGGVF-------PILYIWAIGLLAAGQSSTITGTY 355

  Fly   405 AGQFSMEGFLNLQWPRWCRVLVTRCIAIIPTFCLAM-FSKME-DLTSMNDILNAVMSLQLPFAAI 467
            ||||.|.||||.:..:|.|.|:||..|||||..:|: |...| .|..:|:.||.:.|:|:|||.|
plant   356 AGQFIMGGFLNFKMKKWLRALITRSCAIIPTIIVALVFDSSEATLDVLNEWLNVLQSIQIPFALI 420

  Fly   468 PTIAFTSCAAIMGEFVNGLGNKIVSILLTIVVIGVNLYFVVVQVENMEIKGGL-LALVCIFAILY 531
            |.:...|...|||.|..|...|.::.|:..:||.:|.|.::....| |:.|.: ...|.:|...|
plant   421 PLLCLVSKEQIMGSFKIGPLYKTIAWLVAALVIMINGYLLLEFFSN-EVSGIVYTGFVTLFTASY 484

  Fly   532 ILFNLYLV 539
            ..|.|||:
plant   485 GAFILYLI 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MvlNP_001262795.1 nramp 75..479 CDD:162246 206/410 (50%)
NRAMP3NP_179896.1 SLC5-6-like_sbd 54..432 CDD:444915 206/410 (50%)

Return to query results.
Submit another query.