DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7079 and Jhbp11

DIOPT Version :10

Sequence 1:NP_650936.1 Gene:CG7079 / 42488 FlyBaseID:FBgn0038849 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_651534.2 Gene:Jhbp11 / 43263 FlyBaseID:FBgn0039485 Length:271 Species:Drosophila melanogaster


Alignment Length:242 Identity:57/242 - (23%)
Similarity:96/242 - (39%) Gaps:23/242 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GLQC----QKLPAKVKKCHFGD---GKCLVESANALLRDFPKGIPEVD--LKPFNVLSVRDWLLV 71
            |.||    .:.|:.::.|...:   .||...|..|.:....||:||::  ..|.:.:. ::.|:.
  Fly    16 GAQCVAFYTEKPSYIESCKIYEPEFTKCSTRSIQAFMNQLVKGVPEIEESFGPIDPMR-QEQLVF 79

  Fly    72 NDSQVGGAWYYFNLINQINYGFENTTITEIRGFDKD-PTTTKIEIHGKIPRLVYKGDYVAKGRML 135
            .......|....||.:.:..||....|.|.:...|| ...|||    .:|::...|.|...||:|
  Fly    80 KQDNSDVATLSANLTDMLIRGFGKMLIKESKVSKKDFSWLTKI----YLPQMRIDGHYKMVGRIL 140

  Fly   136 WFVDIHSQGTSESDFLNFQFVLTLKVRVEYRNNKRYLKIYELVPNIRLDRWIMWLDNFF----PD 196
             .|.:...|....:..:...::|.|.|:..:....:..:..:...:.:.:....|||.|    .:
  Fly   141 -LVPLQGNGKIVMEIDDLDILMTTKTRLYEKGGYTFYNVTSVKVKVDVGKVRTRLDNLFNGHSKE 204

  Fly   197 NEDLTIAVNNLFNRNWVEFWNELEPGILRLFETVFLSLFEDLFEKVP 243
            .||.|   |..||.||.:.:..|.|.::...|...|.|....|...|
  Fly   205 VEDST---NQFFNDNWKDVFEALRPLVVETVERTLLDLLHKTFALFP 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7079NP_650936.1 JHBP 20..249 CDD:214779 54/234 (23%)
Jhbp11NP_651534.2 JHBP 24..254 CDD:214779 54/234 (23%)

Return to query results.
Submit another query.