DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rlip and AT4G03100

DIOPT Version :9

Sequence 1:NP_650933.2 Gene:Rlip / 42484 FlyBaseID:FBgn0026056 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_192219.2 Gene:AT4G03100 / 828092 AraportID:AT4G03100 Length:430 Species:Arabidopsis thaliana


Alignment Length:445 Identity:100/445 - (22%)
Similarity:174/445 - (39%) Gaps:129/445 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 KKKDKEEKRKEKDKKADKKD---------KKDKKSKQLSQQQDD------VSAAEEVLALGYP-- 185
            ::|...|:.:|:::...:..         :|...|.::..:|||      :|:|...:.:|:|  
plant    21 RRKSTAEEEEEEEQNQQQLSLVEFLLTALRKSVVSCRVDNRQDDGGVGGGISSAVHHMEIGWPTN 85

  Fly   186 ------------------------------------VFGVSVSLATERSRC---HDGVDIP---L 208
                                                |||||    .|..:|   ..|..:|   |
plant    86 VRHITHVTFDRFHGFLGLPHELQVEIPCRVPSASVSVFGVS----AESMQCSYDEKGNSVPTILL 146

  Fly   209 VVRDCIDFLQDHLKCEQIYKIEPIKTRLMHFKRLYNNREHDSAVDELNLPTAC--SLLKLFLREL 271
            ::::.: :.|..||.|.|::|.|..::..|.:...|.    ..|.| |:...|  .|:|.:.|||
plant   147 LMQERL-YSQQGLKAEGIFRINPENSQEEHVRDQLNR----GIVPE-NIDVHCLAGLIKAWFREL 205

  Fly   272 PEPLLTTDLVARFEEVASHPKVTTQQAELQQLLEQLPKCNRTLLAWVLLHFDAVIQQERHNKLNA 336
            |..:|  |.::. |||.:    ...:.|..:|::||......||.|.:.....|:::|..||:||
plant   206 PSGVL--DGLSP-EEVLN----CNTEDESVELIKQLKPTESALLNWAVDLMADVVEEEESNKMNA 263

  Fly   337 QSLAMLLSPTL-QMSHRLMVALLCHCNNLFADVQLIKYVPPL------------TSTSPKLPDTP 388
            :::||:.:|.: ||:..|  ..|.|.      ||::..:..|            |.:....|...
plant   264 RNIAMVFAPNMTQMTDPL--TALMHA------VQVMNLLKTLITKTLAEREENATGSEGYSPSHS 320

  Fly   389 EDIQTELRKQDSLLSQIHSEMNAGFITKKREEQLWEVQRIITQLKR-----------KLRTFEK- 441
            .:.||:....::...::..|..|.......||::.||::....|.|           .|.:.|| 
plant   321 SNSQTDSDSDNAQDMEVSCESQATDSECGEEEEVEEVEQHQEHLSRHSTHEDETDIGSLCSIEKC 385

  Fly   442 ---KQEKTAEEVDNSSSAPPAVASEDTTDSKPAGTPAVSTNNSISQEEPKTDTLT 493
               :....|..|.|:|      .|||.:   |...|.||..      |.|::||:
plant   386 FLNQLNNNAARVSNTS------ISEDWS---PKAFPLVSFT------ENKSNTLS 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RlipNP_650933.2 RhoGap_RalBP1 187..368 CDD:239846 54/189 (29%)
AT4G03100NP_192219.2 PBD 80..113 CDD:197628 2/32 (6%)
RhoGAP 140..298 CDD:214618 49/178 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1372
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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