DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rlip and Arhgap26

DIOPT Version :9

Sequence 1:NP_650933.2 Gene:Rlip / 42484 FlyBaseID:FBgn0026056 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_036017177.1 Gene:Arhgap26 / 71302 MGIID:1918552 Length:823 Species:Mus musculus


Alignment Length:641 Identity:129/641 - (20%)
Similarity:231/641 - (36%) Gaps:128/641 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 DFSEDHDHSKKDLLIGRRKDKKEKGKDRGYAALEGESSPEEELDTKSPSKSKKSKTFKFTSSKS- 95
            :.::|....|..|.|..:..:..         .||..|..|.|..|......:.||....:.:. 
Mouse   225 ELAKDFGDFKTQLTISIQNTRNR---------FEGTRSEVESLMKKMKENPLEHKTISPYTMEGY 280

  Fly    96 ---KEKRE------KSRDKSEKDSKHAEEEPSVSHKVKEKERDKEKDRDEP--------KKKDKE 143
               :|||.      |.....::|||.....|.      :::...:...||.        :|.|..
Mouse   281 LYVQEKRHFGTSWVKHYCTYQRDSKQITMVPF------DQKSGGKGGEDESVTLKSCTRRKTDSI 339

  Fly   144 EKRKEKDKKADKKDKKDKKSKQLSQQQD-----DVSAAEEVLALGYPVFGVSVSLATERSRCHDG 203
            |||...|.:|  .|:....:.|...::|     :.....|      ||:..:....:|.:...|.
Mouse   340 EKRFCFDVEA--VDRPGVITMQALSEEDRRLWMEAMDGRE------PVYNSNRDSQSEGTAQLDS 396

  Fly   204 VDIPLVVRDCIDFLQDHLKCEQ-IYKIEPIKTRLMHFKRLYNNREHDSAVD-----ELNLPTACS 262
            :... ::|.||..::.....|| :|:|..:.:|:.....:..:.:..|..:     |..:.|..|
Mouse   397 IGFS-IIRKCIHAVETRGINEQGLYRIVGVNSRVQKLLSVLMDPKAASETETDICAEWEIKTVTS 460

  Fly   263 LLKLFLRELPEPLLTTDLVARFEEVASHPKVTTQQAELQQLLEQLPKCNRTLLAWVLLHFDAVIQ 327
            .||.:||.||.||:.......|.:.|......|:.:|:..|:.:||:.||.:|..::.|...|..
Mouse   461 ALKTYLRMLPGPLMMYQFQRSFIKAAKLENQETRVSEIHSLVHRLPEKNRQMLQLLMNHLANVAN 525

  Fly   328 QERHNKLNAQSLAMLLSPTLQMSHRLMVALLCHC--NNLFADVQLIKYVPPLTSTSPKLPDTPED 390
            ..:.|.:...:|.::..|||.......||.:...  .|:..:: ||:....:.:|.|.:|.|...
Mouse   526 NHKQNLMTVANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEI-LIENHEKIFNTVPDVPLTNAQ 589

  Fly   391 IQTELRK-QDSL--------LSQIHSEMNAGFITKKREEQLWEVQRIITQLKRKLRTFEKKQEKT 446
            :....:| .||.        |:..|:..:    |:|:|::    ..||..      :.|......
Mouse   590 LHLSRKKSSDSKPPSCSKRPLTLFHAVPS----TEKQEQR----NSIINS------SLESVSSSA 640

  Fly   447 AEEVDNSSSAPPAVASEDTT-----DSKPAGTPA-VSTNNSISQ-----EEPKTDTLTPKDAPND 500
            ...:::|||..|.:.|.|:.     .|:|:..|. .|..:.:|.     ..|.:...|...:.:.
Mouse   641 NSILNSSSSLQPNLNSSDSNLDVVKPSRPSSLPPNPSPTSPLSPSWPMFSAPSSPMPTSSTSSDS 705

  Fly   501 FTIDPSTGFI---------------------LLPKSNPHRENLLRLQIEYDELMEWQNELKARIV 544
            ..|....||:                     ||....|...||..|....:|.:...:....|  
Mouse   706 SPIRSVAGFVWFSVAAVVLSLAWSSLHAVFSLLVNFVPCHPNLHLLFDRPEEAVREDSSTPFR-- 768

  Fly   545 AERNEVYRLKQLYEQQSINSQMASLASGSQAPPESDYERIIEHYTRENALLEHKKN 600
                   :.|.||..|:.:....|..:|:.      ::.:  |.::|...||...|
Mouse   769 -------KAKALYACQAEHDSELSFTAGTV------FDNV--HPSQEPGWLEGTLN 809

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RlipNP_650933.2 RhoGap_RalBP1 187..368 CDD:239846 42/188 (22%)
Arhgap26XP_036017177.1 BAR 61..234 CDD:416402 1/8 (13%)
BAR-PH_GRAF_family 276..380 CDD:269953 22/117 (19%)
RhoGAP_Graf 373..572 CDD:239839 47/206 (23%)
SH3_GRAF 768..823 CDD:212997 12/59 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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