DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rlip and ralbp1

DIOPT Version :9

Sequence 1:NP_650933.2 Gene:Rlip / 42484 FlyBaseID:FBgn0026056 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_996963.1 Gene:ralbp1 / 404612 ZFINID:ZDB-GENE-040426-2098 Length:665 Species:Danio rerio


Alignment Length:655 Identity:214/655 - (32%)
Similarity:334/655 - (50%) Gaps:130/655 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SPEE---KEFPGLYAS------------EAADAKSRKSKEESDFSEDHDHSKKDLLIGRRKDKKE 54
            |.||   .:|||||.:            |..||.|...||         |:||     :.|.||:
Zfish    29 SSEEISPTKFPGLYRTGDPSPPHDGHHHEPPDAASDDEKE---------HNKK-----KNKFKKK 79

  Fly    55 KGKDRGYAALEGESSPEEELDTKSPSKSKKSKTFKFTSSKSKEKREKSRDKSEKDSKHAEEEPSV 119
            :.:..||||.:.:||.:   |.:||||.|:||..                       |..::||.
Zfish    80 EKRTEGYAAFQEDSSAD---DAESPSKMKRSKGI-----------------------HVFKKPSF 118

  Fly   120 SHKVKEKERDKEKDRDEPKKKDKEEKRKEKDKK----AD--KKDKKDKKSKQLSQQQDDVSAAEE 178
            |.|       ||||....:|..||||.|:|..|    ||  |:.|:.||.|:.|.:.:.|  ..|
Zfish   119 SKK-------KEKDFKVKEKGPKEEKAKDKKSKDLTAADVVKQWKEKKKKKKPSTEPEPV--ITE 174

  Fly   179 VLALGYPVFGVSVSLATERSRCHDGVDIPLVVRDCIDFLQDH-LKCEQIYKIEPIKTRLMHFKRL 242
            |.....|:||.|:..|..|:..:||:.:|.:.|:|:|:::.: :|||.||::..:|:::...|..
Zfish   175 VTVTFRPIFGASLVEAVRRTALYDGIQLPAIFRECVDYIESYGMKCEGIYRVSGMKSKVDELKAA 239

  Fly   243 YNNREHDSAVDELNLPTACSLLKLFLRELPEPLLTTDLVARFEEVASHPKVTTQQAELQQLLEQL 307
            | :||....::|.:..|..||||.:|||||:.||..:|..||||....|....:..|.|:||.::
Zfish   240 Y-DREECPCLEEYDPHTVASLLKQYLRELPDNLLGKELSLRFEEACGRPSEAEKLQEFQRLLTEV 303

  Fly   308 PKCNRTLLAWVLLHFDAVIQQERHNKLNAQSLAMLLSPTLQMSHRLMVALLCHCNNLFADVQLIK 372
            |..:|.||||::.|.|.||.:|...|:|.|:::::|:||:|:|:|::.....|...:|.||.|..
Zfish   304 PAGSRLLLAWLITHMDHVIAREADTKMNIQNISIVLNPTIQISNRVLYVFFTHVREMFGDVFLKP 368

  Fly   373 YVPPL----TSTSPKLPDTPEDIQTELRKQDSLLSQIHSEMNAGFITKKREEQLWEVQRIITQLK 433
            .|.||    .:|.|.||||.|.|:.|:|:|:.||:::|.::.||.....:||:|||||||:|.||
Zfish   369 VVHPLRWSNMATMPTLPDTQESIKEEIRRQEFLLNRLHRDLQAGVKDLSKEERLWEVQRIVTALK 433

  Fly   434 RKLRTFEKKQE---KTAEEVDNSSSAPPAVASEDTTDSKPAGTPAVSTNNSISQEEPKTDTLTPK 495
            ||||. .|:||   |.|:|:  :|.:...|:.|:.|:               ::||         
Zfish   434 RKLRE-AKRQECETKIAQEI--ASLSKEDVSKEEMTE---------------NEEE--------- 471

  Fly   496 DAPNDFTIDPSTGFILLPKSNPHRENLLRLQIEYDELMEWQNELKARIVAERNEVYRLK------ 554
                  .|:     :||.:.|       .:..|.:||:..:..|:.:|..|:.|:.||:      
Zfish   472 ------VIN-----LLLAQEN-------EILTEQEELISLEQVLRRQIATEKEEIERLRAEIADI 518

  Fly   555 QLYEQQSINSQMASLASGSQAPPESDYERIIEHYTRENALLEHKKNMLGMELKEERRACIALQVE 619
            |..:|....::..|..|.|::..|.:.:.|:|...::|..||:|...|...:.||:.|.:.|:|:
Zfish   519 QSRQQGRSETEEYSSDSESESEDEEELQMILEDLQKQNEELENKNTHLNQAIHEEQEAILELRVQ 583

  Fly   620 LRLQQ 624
            |||.|
Zfish   584 LRLLQ 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RlipNP_650933.2 RhoGap_RalBP1 187..368 CDD:239846 66/181 (36%)
ralbp1NP_996963.1 RhoGap_RalBP1 183..364 CDD:239846 66/181 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580371
Domainoid 1 1.000 116 1.000 Domainoid score I5943
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 286 1.000 Inparanoid score I2830
OMA 1 1.010 - - QHG49463
OrthoDB 1 1.010 - - D514124at2759
OrthoFinder 1 1.000 - - FOG0005056
OrthoInspector 1 1.000 - - oto39474
orthoMCL 1 0.900 - - OOG6_107500
Panther 1 1.100 - - LDO PTHR12783
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1110.910

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