DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rlip and ARHGAP5

DIOPT Version :9

Sequence 1:NP_650933.2 Gene:Rlip / 42484 FlyBaseID:FBgn0026056 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_001025226.1 Gene:ARHGAP5 / 394 HGNCID:675 Length:1502 Species:Homo sapiens


Alignment Length:446 Identity:92/446 - (20%)
Similarity:181/446 - (40%) Gaps:87/446 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PEEKEFPGLYASEAADAKSRKSKEESDFSEDHDHSKKDLLIGRRKDKKEKGKDRGYAALEGESSP 70
            ||:.:....||........:|...:..:....|...:..:.....:..:..::.|::....:|..
Human  1082 PEDMDPSDNYAEPIDTIFKQKGYSDEIYVVPDDSQNRIKIRNSFVNNTQGDEENGFSDRTSKSHG 1146

  Fly    71 EEELDTKSPSKSK-KSKTFKFTSSKSKEKREKS---------RDKSEKDSKH--AEEEPSVSHK- 122
            |     :.|||.| ||||. |:.:||..:|..|         ..|:::..:|  :||:|.:|.. 
Human  1147 E-----RRPSKYKYKSKTL-FSKAKSYYRRTHSDASDDEAFTTSKTKRKGRHRGSEEDPLLSPVE 1205

  Fly   123 -----------VKEKERDKEKDRDEPKKKDKEEKRKEKDKKADKKDKKDKKSKQLSQQQDDVSAA 176
                       ..::|.|.:|.:.:..|..:::|:|:|.|..:...:::.:|........|:..|
Human  1206 TWKGGIDNPAITSDQELDDKKMKKKTHKVKEDKKQKKKTKNFNPPTRRNWESNYFGMPLQDLVTA 1270

  Fly   177 EEVLALGYPVFGVSVSLATERSRCHDGVDIPLVVRDCIDFLQDHLKC-EQIYKIEPIKTRLMHFK 240
            |:                          .|||.|..|::|::|...| |.:|::...||...:.:
Human  1271 EK--------------------------PIPLFVEKCVEFIEDTGLCTEGLYRVSGNKTDQDNIQ 1309

  Fly   241 RLYNNREHDSAVD-ELNLPTACSLLKLFLRELPEPLLTTDLVARFEEVASHPKVTTQQAELQQLL 304
            :.::...:.:.|. |:.:......||.|..:||:||:...|.....|.|..|..|.:...|::::
Human  1310 KQFDQDHNINLVSMEVTVNAVAGALKAFFADLPDPLIPYSLHPELLEAAKIPDKTERLHALKEIV 1374

  Fly   305 EQLPKCNRTLLAWVLLHFDAVIQQERHNKLNAQSLAMLLSPTLQMS-------------HRLMV- 355
            ::....|..:..:|:.|.:.|.||.:.|.:.|.:|::...|||...             |:.:| 
Human  1375 KKFHPVNYDVFRYVITHLNRVSQQHKINLMTADNLSICFWPTLMRPDFENREFLSTTKIHQSVVE 1439

  Fly   356 ALLCHCNNLFADVQLIK----YVPPLTSTSPKL-----------PDTPEDIQTELR 396
            ..:..|...|.:.::::    ..||..|...:|           |..|:.||.:|:
Human  1440 TFIQQCQFFFYNGEIVETTNIVAPPPPSNPGQLVEPMVPLQLPPPLQPQLIQPQLQ 1495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RlipNP_650933.2 RhoGap_RalBP1 187..368 CDD:239846 43/196 (22%)
ARHGAP5NP_001025226.1 P-loop_NTPase 31..246 CDD:422963
RhoGAP-FF1 260..338 CDD:406821
FF 368..420 CDD:128718
FF 429..481 CDD:128718
FF 484..533 CDD:128718
pseudoGTPaseD_p190RhoGAP-B 592..762 CDD:412065
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 975..1004
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1022..1050
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1069..1089 2/6 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1125..1156 7/35 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1168..1254 16/85 (19%)
RhoGAP_p190 1260..1444 CDD:239838 44/209 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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