DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rlip and FAM13A

DIOPT Version :9

Sequence 1:NP_650933.2 Gene:Rlip / 42484 FlyBaseID:FBgn0026056 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_055698.2 Gene:FAM13A / 10144 HGNCID:19367 Length:1023 Species:Homo sapiens


Alignment Length:522 Identity:106/522 - (20%)
Similarity:202/522 - (38%) Gaps:127/522 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 KKDKKDKKSKQLSQQQDDVSAAEEVLALGY-PVFGVSVSLATERSRCHDGVDIPLVVRDCIDFLQ 218
            |:|.|...:..|::|:|          ..| .:||||:.....:....:|  ||.||.:.:::|.
Human    18 KEDMKKIVAVPLNEQKD----------FTYQKLFGVSLQELERQGLTENG--IPAVVWNIVEYLT 70

  Fly   219 DH-LKCEQIYKIEPIKTRLMHFKRLYNNREHDSAVD-EL----NLPTACSLLKLFLRELPEPLLT 277
            .| |..|.::::.. ..:::...||    :.:|.|. ||    ::.:|.|||||||||||:.|:|
Human    71 QHGLTQEGLFRVNG-NVKVVEQLRL----KFESGVPVELGKDGDVCSAASLLKLFLRELPDSLIT 130

  Fly   278 TDLVARFEEVASHPKVTTQQAELQQLLEQLPKCNRTLLAWVLLHFDAVIQQERHNKLNAQSLAML 342
            :.|..||.::....:...|::.|:.|:::||..:..||.::......|.:....|::|..:||.:
Human   131 SALQPRFIQLFQDGRNDVQESSLRDLIKELPDTHYCLLKYLCQFLTKVAKHHVQNRMNVHNLATV 195

  Fly   343 LSPTL-------------QMSHRLMVALLCHCNNLF---------------ADVQLIKYV----- 374
            ..|..             .:.:::|..:|.:.|.||               |.:.::|.|     
Human   196 FGPNCFHVPPGLEGMKEQDLCNKIMAKILENYNTLFEVEYTENDHLRCENLARLIIVKEVYYKNS 260

  Fly   375 ----------------PPLTS---------------TSPKLPDTPEDIQTELRKQDSLLSQIHS- 407
                            ||.|.               ..|:|.|....:...|..:.:.|..::| 
Human   261 LPILLTRGLERDMPKPPPKTKIPKSRSEGSIQAHRVLQPELSDGIPQLSLRLSYRKACLEDMNSA 325

  Fly   408 --EMNAGFITKKREEQ-----------LWEVQRIITQLKRKLRTFEKKQEKTAEEVDNSSSAPPA 459
              .::|..:...:|::           :.:|..:....:...||.....|:...:|:||...   
Human   326 EGAISAKLVPSSQEDERPLSPFYLSAHVPQVSNVSATGELLERTIRSAVEQHLFDVNNSGGQ--- 387

  Fly   460 VASEDTTDSKPAGTPAVSTNNSISQEEPKTDTLTPKDAPNDFTIDPSTGFILLPKSN-PHRENLL 523
             :|||:.....:.:.|.|......|.:.:.:....:|..            |:.|.| |...|.|
Human   388 -SSEDSESGTLSASSATSARQRRRQSKEQDEVRHGRDKG------------LINKENTPSGFNHL 439

  Fly   524 RLQIEYDELMEWQNELKARIVAERNEVYR------LKQLYEQQS--INSQMASLASGSQAPPESD 580
            ...|...:.:|..::.......||::..|      |.:|::.|.  :|.:..:.....:.....|
Human   440 DDCILNTQEVEKVHKNTFGCAGERSKPKRQKSSTKLSELHDNQDGLVNMESLNSTRSHERTGPDD 504

  Fly   581 YE 582
            :|
Human   505 FE 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RlipNP_650933.2 RhoGap_RalBP1 187..368 CDD:239846 55/214 (26%)
FAM13ANP_055698.2 RhoGAP_FAM13A1a 39..226 CDD:239858 51/193 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 269..290 3/20 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..437 14/71 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 459..562 9/48 (19%)
HMMR_N 617..>819 CDD:292527
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 628..663
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 726..759
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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