DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rlip and arhgap11a.2

DIOPT Version :9

Sequence 1:NP_650933.2 Gene:Rlip / 42484 FlyBaseID:FBgn0026056 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_012824473.1 Gene:arhgap11a.2 / 100495220 XenbaseID:XB-GENE-5843957 Length:804 Species:Xenopus tropicalis


Alignment Length:420 Identity:82/420 - (19%)
Similarity:160/420 - (38%) Gaps:84/420 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   200 CHDGVDIPLVVRDCIDFLQDHLKCEQIYKIEPIKTRLMHFKRLYNNREHDSAVDELNLPTACSLL 264
            |:...:||..|.|...||..||..|.:::.....||:...|....:.|  .:::........:||
 Frog    52 CNTEGNIPQFVVDTCQFLSCHLGTEGLFRKSGSVTRIRTLKAQLESNE--CSLESAQPSDVAALL 114

  Fly   265 KLFLRELPEPLLTTDL---VARFEEVASHPKVTTQQAELQQLLEQLPKCNRTLLAWVLLHFDAVI 326
            |.|.||||:||:..:|   :.:..|:.|.....:....:..|   ||..:...|.:......:|.
 Frog   115 KQFFRELPQPLIPLELQDPLCQIHEILSEESRVSATILVTCL---LPAIHMGTLRYFCTFLQSVA 176

  Fly   327 QQERHNKLNAQSLAMLLSPT------------------LQMSHRLMVALLCHCNNLFADVQLIKY 373
            .:...|::::.:||::|:|.                  ||:...:|..|:.:.:|:   .||..:
 Frog   177 SRCNENRMDSANLAVVLAPNLFASTGLGERLTHSTERQLQLQTAVMQTLIQNASNI---GQLPSF 238

  Fly   374 VPPLTSTSPKLPDTPEDIQTEL-------------RKQDSLLSQIHSEMNAGFITKKREEQLWEV 425
            :      ..|:|...:.::.||             |....|:::..|::..|         ....
 Frog   239 I------LSKIPLAHDAVEEELVTPSGGVNRRRRRRSMSGLVNEALSKLKPG---------RGAS 288

  Fly   426 QRIITQLKRKLRTFEKKQEKTAEEVDNSS----SAPPAVASEDTTDSKPAGTPAVSTNNSISQE- 485
            ..::.|...:....|:.:.|.....|:.|    :|....:..|.||.|..........||:|.: 
 Frog   289 TNVLDQATGEEGQHERYKSKRKASEDSGSGEHCTAKKRKSLRDITDEKLYNEDLCEPVNSVSPQR 353

  Fly   486 ---EPKTDTLTPKDAPNDFTIDPSTG---FILLPKSNPHRENL----------LRLQIEYDELME 534
               :...|.|:....|    ::.|||   .:..|:|:...:.:          .|:...:..:..
 Frog   354 VFVDASPDLLSSPSTP----LELSTGSPAILATPESSSRGQRVKGKRKESKRPKRMHSGHICVSP 414

  Fly   535 WQNELKARIVAERNEVYRLKQLYEQQSINS 564
            .|.|.|.::.:.....:|::  ..:||:||
 Frog   415 AQLERKEKVRSSMRLFHRMR--VSKQSVNS 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RlipNP_650933.2 RhoGap_RalBP1 187..368 CDD:239846 42/188 (22%)
arhgap11a.2XP_012824473.1 RhoGAP-ARHGAP11A 41..240 CDD:239859 44/201 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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