DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rlip and ralbp1

DIOPT Version :9

Sequence 1:NP_650933.2 Gene:Rlip / 42484 FlyBaseID:FBgn0026056 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_017950523.1 Gene:ralbp1 / 100379815 XenbaseID:XB-GENE-1016073 Length:673 Species:Xenopus tropicalis


Alignment Length:668 Identity:215/668 - (32%)
Similarity:341/668 - (51%) Gaps:130/668 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SPEE---KEFPGLYASEAADAKSRKSKEESDF-SEDH-DHSKKDLLIGRRKDKKEKGKDRGYAAL 64
            |.||   .:|||||.:...........|..|. |||. ||.||     :.|.||::.:..||||.
 Frog    29 SSEEISPTKFPGLYRTGEPSPPHDIPYEPPDIVSEDEKDHGKK-----KGKFKKKEKRTEGYAAF 88

  Fly    65 EGESSPEEELDTKSPSKSKKSKTFKFTSSKSKEKREKSRDKSEKDSKHAEEEPSVSHKVKEKERD 129
            :.:||.:|   .:||||.|:||..                       |..::||.|   |:||:|
 Frog    89 QEDSSGDE---AESPSKMKRSKGI-----------------------HVFKKPSFS---KKKEKD 124

  Fly   130 ---KEKDRDEPKKKDKEEKRKEKDKKAD---KKDKKDKKSKQLSQQQDDVSAAEEVLALGYPVFG 188
               |||.:::..|:||.:::|.||..|.   |:.|:.||.|:.:.:.:.:......|.   |:||
 Frog   125 FKIKEKPKEDKHKEDKHKEKKSKDLTAADVVKQWKEKKKKKKPTPEPESLPVDIPRLR---PMFG 186

  Fly   189 VSVSLATERSRCHDGVDIPLVVRDCIDFLQDH-LKCEQIYKIEPIKTRLMHFKRLYNNREHDSAV 252
            :.:..|.||:..:||:.:|.|.|:|||:::.| :|||.||::..||:::...|..|:..|..: :
 Frog   187 IPLVEAAERTMMYDGIRLPAVFRECIDYIEQHGMKCEGIYRVSGIKSKVDELKAAYDRGESPN-L 250

  Fly   253 DELNLPTACSLLKLFLRELPEPLLTTDLVARFEEVASHPKVTTQQAELQQLLEQLPKCNRTLLAW 317
            ::....|..||||.:||||||.:||.||:.||||.........:..|.|:||::||:||..|.:|
 Frog   251 EDYEPYTVASLLKQYLRELPENVLTKDLMPRFEEACGKSTEGERLQECQRLLKELPECNFCLTSW 315

  Fly   318 VLLHFDAVIQQERHNKLNAQSLAMLLSPTLQMSHRLMVALLCHCNNLFADVQLIKYVPPL----T 378
            :::|.|.||::|...|:|.|:::::||||:|:|:|::.....|...||..:|:.:.:.||    .
 Frog   316 LIVHMDHVIEKELETKMNIQNISIVLSPTVQISNRVLYVFFTHVQELFGGIQIKRVIKPLRWSNM 380

  Fly   379 STSPKLPDTPEDIQTELRKQDSLLSQIHSEMNAGFITKKREEQLWEVQRIITQLKRKLRTFEKK- 442
            :|.|.||:|.|.|:.|:|:|:.||:.:|.|:.||.....:||:|||||||:|.||||||..::: 
 Frog   381 ATMPTLPETQETIKEEIRRQEFLLNCLHRELQAGIKDLSKEERLWEVQRILTALKRKLREAKRQD 445

  Fly   443 -QEKTAEEVDNSSSAPPAVASEDTTDSKPAGTPAVSTNNSISQEEPKTDTLTPKDAPNDFTIDPS 506
             :.|.|:|:  :|.:...|:.|:.|:               ::||...                 
 Frog   446 CETKIAQEI--ASLSKEDVSKEEMTE---------------NEEEVLN----------------- 476

  Fly   507 TGFILLPKSNPHRENLLRLQIEYDELMEWQNELKARIVAERNEVYRLK-QLYEQQSINSQMA--- 567
               |||.:.|       .:..|.:||:..:..|:.:|..|:.|:.||: ::.|.||...|..   
 Frog   477 ---ILLAQEN-------EILTEQEELVAMEQYLRRQIATEKEEIERLRAEISEIQSRQQQHGRSE 531

  Fly   568 ----SLASGSQAPPESDYERIIEHYTRENALLEH----------------------KKNMLGMEL 606
                |..|.|::..|.:.:.|:|...|:|..||.                      |.|.|...:
 Frog   532 TEEYSSESESESEDEDELQYILEDLQRQNEELEEHWDTSQDLCWVLRLTFCLFHQIKNNHLNQAI 596

  Fly   607 KEERRACIALQVELRLQQ 624
            .|||.|.|.|:|:|||.|
 Frog   597 HEEREAIIELRVQLRLLQ 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RlipNP_650933.2 RhoGap_RalBP1 187..368 CDD:239846 71/181 (39%)
ralbp1XP_017950523.1 RhoGap_RalBP1 185..366 CDD:239846 71/181 (39%)
SMC_prok_B <390..>571 CDD:274008 63/224 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 120 1.000 Domainoid score I5692
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 287 1.000 Inparanoid score I2772
OMA 1 1.010 - - QHG49463
OrthoDB 1 1.010 - - D514124at2759
OrthoFinder 1 1.000 - - FOG0005056
OrthoInspector 1 1.000 - - oto104418
Panther 1 1.100 - - LDO PTHR12783
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4417
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.110

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