DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rlip and arhgap22

DIOPT Version :9

Sequence 1:NP_650933.2 Gene:Rlip / 42484 FlyBaseID:FBgn0026056 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_002940376.2 Gene:arhgap22 / 100127847 XenbaseID:XB-GENE-5807514 Length:544 Species:Xenopus tropicalis


Alignment Length:543 Identity:121/543 - (22%)
Similarity:207/543 - (38%) Gaps:165/543 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 QQQDDVSAAEEVL--ALGYPVFGV----SVSLATERSRCHDGVDIPLVVRDCIDFLQDH-LKCEQ 225
            :.:|.|.|..:|:  ..|..|||.    :|||.|..:        ||||..|:||:::: |:.|.
 Frog    34 EMEDWVRAIHKVIWAPFGGAVFGQRLEDAVSLETRHA--------PLVVEQCVDFIRENGLQEEG 90

  Fly   226 IYKIEPIKTRLMHFKRLYNNREHDSAVDELNLPTACSLLKLFLRELPEPLLTTDLVARFEE---- 286
            ::::....|.:...:..:::....:.....::.|..|||||:|||||||::.   .:|:::    
 Frog    91 LFRLPGQATLVKELQDTFDSGGKPTFDKSTDVHTVASLLKLYLRELPEPVIP---FSRYQDFLRC 152

  Fly   287 ---VASHPKVTTQQAELQQLLEQLPKCNRTLLAWVLLHFDAVIQQERHNKLNAQSLAMLLSPTL- 347
               ::......||  ||..|::.||..|..||.::....|.|......||:|.|:||.:.:|.: 
 Frog   153 AHILSGDQGEGTQ--ELSILIKSLPPVNYNLLKYICSFLDEVQSYSDTNKMNVQNLATVFAPNIL 215

  Fly   348 ---------------QMSHRLMVALLCHCNN-LFADVQLIKYVPPLTSTSPKLPDTP--EDIQTE 394
                           .:.|  ::.:|.|.|: :|   |.:....|:..:..::.:|.  :|:.| 
 Frog   216 RPKQQDPVALIEGASLIQH--LLTILIHENHWIF---QAVSADSPVGVSVQQIDNTQSIQDVDT- 274

  Fly   395 LRKQDSLLSQIHSEMNAGFITKKREEQLWEVQRIITQLK-------------------------- 433
               ..||...:|.          ..||.|...:|....|                          
 Frog   275 ---AKSLEPTLHG----------NHEQTWAKSQIFANWKASFMLSSSKPVFPSCDPSNLPPSVSW 326

  Fly   434 -----RKLRTFEKKQEKTAEEV---DNSSSAPPAVASEDTTD-----------SKPA-GTPAVST 478
                 ..||:.::|....|:.:   ||..|..|::.|.:.:.           |.|| |...||.
 Frog   327 LQDGFSSLRSHKEKDSVKAQRLSSYDNVPSCLPSLPSSNWSSFSNVSLNESLCSCPACGGSQVSQ 391

  Fly   479 NN------SISQEEPKTDTLTPKDAPNDFTIDPSTGFILLPKSNPHRENLLRLQIEYDELMEWQN 537
            .:      |:|:.|                    .|.:.||.|....|..:......|.|.....
 Frog   392 GSESGWHLSLSESE--------------------RGILPLPSSIERLELCVSSSGNSDTLTSDSG 436

  Fly   538 EL---KARIVAERNEVYRLKQLYEQQSINSQMASLASGSQAPPESDYERIIEHYTRENA-LLEHK 598
            |:   ..:||:|..|     ||.:||                  .:||..||...:..| :|.|.
 Frog   437 EVWNTYQKIVSELKE-----QLAKQQ------------------VEYENKIESLEKSRAEVLVHV 478

  Fly   599 KNMLGMELKEERRACIALQVELR 621
            :: |...|.:|:..|..|:::||
 Frog   479 RS-LQNTLDQEKNRCTLLEIKLR 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RlipNP_650933.2 RhoGap_RalBP1 187..368 CDD:239846 54/209 (26%)
arhgap22XP_002940376.2 PH-like <16..52 CDD:388408 4/17 (24%)
RhoGAP 53..247 CDD:383032 54/208 (26%)
Myosin_tail_1 <446..>521 CDD:366712 21/79 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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