DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rlip and asap1

DIOPT Version :9

Sequence 1:NP_650933.2 Gene:Rlip / 42484 FlyBaseID:FBgn0026056 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_031759002.1 Gene:asap1 / 100036721 XenbaseID:XB-GENE-1013472 Length:1136 Species:Xenopus tropicalis


Alignment Length:641 Identity:120/641 - (18%)
Similarity:224/641 - (34%) Gaps:188/641 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KEFPGLYASEAADAKSRKSKEESDFSEDHDHSKKDLLIGRRKDKKE-KGKDRGYA--ALEGESSP 70
            |::....|::..:.|..:.:|:...:...|..|..|.:.:::.::: :.|..||:  .|:|    
 Frog   262 KQYIEKLAADLYNIKQTQDEEKKQLTALRDLIKSSLQLDQKESRRDSQSKQAGYSMHQLQG---- 322

  Fly    71 EEELDTKSPSKSKKSKTFKFTSSKSKE-KREKSRDKSEKDSKHAEEEPSVSHKVKEKERDK---- 130
                 .|.....||....|.:....|. :|.|...|:        ...::||....:...|    
 Frog   323 -----NKEYGSEKKGYLLKKSDGIRKVWQRRKCTVKN--------GILTISHATSNRPPTKLNLL 374

  Fly   131 ----EKDRDEPK--------------KKDKEE-------KRKEKDKKADKKDKKDKKSKQLSQQQ 170
                :.:.||.|              .:|::|       ....|:...:...:.|:.:.:.|.:.
 Frog   375 TCQVKPNADEKKCFDLISHNRTYHFQAEDEQEYIAWISVLTNSKEDALNMAFRGDQSTGESSLED 439

  Fly   171 ------DDV--SAAEEVLALGYPVFGVSVSLATERSRCHDGVDIP------LVVRDCIDF----- 216
                  |||  :...||.                   |..|...|      |.:..||:.     
 Frog   440 LTKAIIDDVQKTPGNEVC-------------------CDCGSPDPTWLSTNLGILTCIECSGIHR 485

  Fly   217 -LQDHLKCEQIYKIEPIKT-RLMHFKRLYNNREHDSAVDELNLPTACSLLKLFLRELPEPLLTTD 279
             :..|:...|..:::.:.| .|:..|.:.||..:|.....|..|:|            :|..::|
 Frog   486 EMGVHISRIQSLELDKLGTSELLLAKNVGNNSFNDIMEGNLLSPSA------------KPSPSSD 538

  Fly   280 LVARFEEVAS-------HPKVTTQQAE-LQQLLEQLPKCNRTLLAWVLLHFDAV-IQQ---ERHN 332
            ::||.|.:.:       ..|:.:..|| |.:|||.:.  :|.|||.:.::.:.| |.:   |...
 Frog   539 MIARKEYITAKYVERRFSRKICSTGAEKLNELLEAVK--SRDLLALIQVYAEGVEIMEPLLESGQ 601

  Fly   333 KLNAQSLAMLLSPTLQMSHRLMVALLCHCNNLFADVQ----------------------LIKYVP 375
            :....:|...:......|..|:..|:.:|.||  |.|                      |::..|
 Frog   602 EPGETALHYAVRTADHTSLPLVDFLVQNCGNL--DKQTGKGNTALHYCCLYNKPECLKLLLRGKP 664

  Fly   376 PLTSTSPKLPDTPEDI-------QTELRKQDSLLSQIHSEMNAGFITKKREEQLWEVQRIITQLK 433
            .:.:.: .:.:|..|:       |.|.....:|..:::..::..:....|:|::.|..   ..|:
 Frog   665 TIDAVN-HIGETAFDVAKRQKAAQCEELVSQALAGKLNPHVHVEYDWNLRQEEMDESD---DDLE 725

  Fly   434 RKLRTFEKKQEKTAEEVDNSSSAPPAVASEDTTDSKPAGTP--------AVSTNN---SISQEEP 487
            .|....:|::....:...:|||..|    :|........||        ...||.   |.|.:.|
 Frog   726 DKPSPIKKERSPRPQSFCHSSSISP----QDKLSLPGFSTPRDKQRLSYGAFTNQIFMSTSTDSP 786

  Fly   488 KTDT-----LTPKDA------PNDFTIDPST----GFILLPKSNP------HRENL 522
            .:.|     |.|::|      |.. |:..||    |...|.|..|      |:..|
 Frog   787 TSPTADAPPLPPRNAGKVASGPTS-TLPLSTQSPSGSSTLSKKRPPPPPPGHKRTL 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RlipNP_650933.2 RhoGap_RalBP1 187..368 CDD:239846 43/205 (21%)
asap1XP_031759002.1 BAR_ASAP1 54..268 CDD:153325 1/5 (20%)
PH_ASAP 319..425 CDD:270071 19/122 (16%)
ArfGap_ASAP1 440..561 CDD:350073 28/151 (19%)
Ank_2 585..660 CDD:403870 12/76 (16%)
ANK repeat 604..637 CDD:293786 8/34 (24%)
ANK repeat 639..670 CDD:293786 2/30 (7%)
PHA03247 <735..1052 CDD:223021 26/112 (23%)
SH3_ASAP1 1078..1134 CDD:212898
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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