DRSC/TRiP Functional Genomics Resources

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Protein Alignment Alp5 and Alp6

DIOPT Version :10

Sequence 1:NP_650931.1 Gene:Alp5 / 42482 FlyBaseID:FBgn0038845 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_610496.1 Gene:Alp6 / 35981 FlyBaseID:FBgn0033423 Length:515 Species:Drosophila melanogaster


Alignment Length:538 Identity:251/538 - (46%)
Similarity:334/538 - (62%) Gaps:54/538 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RLLNALLIAIVLVAHPAWSAPECGRTPEECREHRMHPDMPEPERHGKAF-------RVVDGEDTN 60
            |.:..|::|:.|      |....|:        |.||       .|::|       :..:.:.|.
  Fly     4 RFILLLVLAVCL------SGSASGQ--------RDHP-------RGRSFDAESHPIKYAEEQQTQ 47

  Fly    61 AYWRQQGVQFVQQKLASEPN--KRQAKNVILFLGDGMGVTTTSAARNLLGGEEKSLSFENFPFTG 123
             ||..:....:..|||.:.:  ..:||||||||||||.|.|.:|.|||||...:.:.||.||:||
  Fly    48 -YWVDKAQAKLLSKLAEQESATTNKAKNVILFLGDGMSVHTVTATRNLLGDSAEQVYFEGFPYTG 111

  Fly   124 LSKTYSVDKIVPDSACTATAYLCGVKGQEGTIGVNGQVPRTDCKVMLDESTHVDSIAKWAMEAGK 188
            |||||.|::.|.||||||||||.|||...||||||..|.|..|....:|...|.|||.||..|||
  Fly   112 LSKTYCVNRQVADSACTATAYLGGVKANYGTIGVNANVSRYSCDGAANEEDRVLSIAHWAQAAGK 176

  Fly   189 WAGLVTTTRVTHASPSGVYAHIAERDWENDAEVAT-DCGAGSGINDIAYQLARGEVGSKLKVIMG 252
            .||||||.|||||||:|||||||:|:||||.|||. :|.....| |||.||....||.:||||:|
  Fly   177 DAGLVTTARVTHASPAGVYAHIADRNWENDWEVANRECDPEQTI-DIARQLVEQPVGQQLKVILG 240

  Fly   253 GGRKHFVDSSL---ESW-GKRTDGLNLI----DEFKSASENNVYVTTAAELAAVDVTKTDRLLGL 309
            ||||:|:|:::   |.: ||||||.:||    |:.|.|:.:..||.:...|:.||:..||.||||
  Fly   241 GGRKNFIDATVNDEEGYPGKRTDGRHLIRSWLDQKKEANVSAKYVWSRKGLSLVDLENTDYLLGL 305

  Fly   310 FNDDHLQYLMETTTESSQ---PTLEQMTRKAIEYMSQNEQGYFLFIEGGRIDQAHHINQARMALN 371
            |.:|||.|..:...:.||   |:|.::|..||..:|:|::|:|||:||.|||.|||...|:.:|.
  Fly   306 FANDHLPYNGDRDRKRSQLADPSLSELTEAAITVLSRNDKGFFLFVEGARIDMAHHDTFAKRSLE 370

  Fly   372 ETIEFSKAIAAAQELTSEDDTLLVVTADHSHVFTYAGYSYRGSDVFGKTPVNGHDGKPYMVLSYA 436
            :|.||::|:..|:|||||||||:||||||:||.:..||.||..::.|...: ..|..||.:||||
  Fly   371 DTAEFARAVQKARELTSEDDTLIVVTADHAHVMSINGYPYRDQEITGLAQL-ADDNLPYTILSYA 434

  Fly   437 NGPSYENFYDAETMERKDPTTVVK----GDHDDEFPSGVPIDMDSHGGDDVPVYALGPWAHLFTG 497
            |||.|.:.|:     |.:...::|    .|.|.::|:..|:|.::||||||.|||.||:|..|:|
  Fly   435 NGPGYYSGYN-----RAEGRALLKEKLVADSDYQYPTLAPLDAETHGGDDVAVYASGPYAQYFSG 494

  Fly   498 VYEQSTIPHMMAYASCLG 515
            .||||.||.:||.|:.:|
  Fly   495 NYEQSNIPALMARAAGIG 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Alp5NP_650931.1 alkPPc 85..515 CDD:214515 232/445 (52%)
Alp6NP_610496.1 alkPPc 73..512 CDD:214515 232/445 (52%)

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