DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Calx and Adgrv1

DIOPT Version :9

Sequence 1:NP_001247215.1 Gene:Calx / 42481 FlyBaseID:FBgn0013995 Length:973 Species:Drosophila melanogaster
Sequence 2:XP_017170852.1 Gene:Adgrv1 / 110789 MGIID:1274784 Length:6326 Species:Mus musculus


Alignment Length:900 Identity:207/900 - (23%)
Similarity:311/900 - (34%) Gaps:261/900 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 GEAP--DAEELRECSEGLVLPLWMPQRNISVGDRLVR-GFVYFVLLIYL------FV-GVSIIAD 143
            |.:|  .|:....|:|..:||...|.        |.| |.:...||:||      || |.:.|  
Mouse     5 GSSPRRSADLAARCAEDSLLPGQSPP--------LHRPGMISSFLLVYLSTLFISFVFGEAEI-- 59

  Fly   144 RFMAAIEAITSIERAVVVKGPNNTKQVMHVRIWNETVANLTLMALGSSAPEILLSVIEIYAKDFE 208
            ||....|...           |.|         :.||..|.:..:|.  |..:.:::.:..:|  
Mouse    60 RFTGQTEFFV-----------NET---------STTVIRLVIERIGE--PANVTAIVSLSGED-- 100

  Fly   209 SGDL---GPGTIVGSAAYNLFMIIAVCMIWIPAGEVRRIRHL--------------RVFFVTALF 256
            :||.   .....:.:...|..:.||||...:|..:.....||              |...||.|.
Mouse   101 TGDFFDTYAAAFIPARGTNRTVYIAVCDDDLPEPDETFTFHLTLQKPSANVKLGWPRAASVTILS 165

  Fly   257 SVFAYVWLWLILSVFTPGVILVWEAIVTLLFFPLTVLWAYIAERRLLVYKYMDKNYRVNKRGT-- 319
            :..|:.    |:|..||..|.|.|........|||:                     :.::||  
Mouse   166 NDNAFG----IISFSTPSSISVIEPRSRNASVPLTL---------------------IREKGTYG 205

  Fly   320 VVAGEHDQVEMDAEKGPKQPM--VTSARGNDAEAFDEARREYITLLTELRQKYPDAD---LEQLE 379
            :|.     |..|...||..|.  :...|||  ..|...|...|..:|.|..:.|:.|   |.|| 
Mouse   206 MVT-----VTFDVSGGPNPPEEDLNPVRGN--ITFPPGRATVIYNVTVLDDEVPENDELFLIQL- 262

  Fly   380 MMAQEQVLARSSKSRAFYRIQATRKMVGSGNLMRKIQERAHSDLTEVKAQLHAGDDEEADDPIRM 444
                     ||.:..|  .|.|:|..|                  |:..       ::.|.|:. 
Mouse   263 ---------RSVEGGA--EINASRSSV------------------EIIV-------KKNDSPVN- 290

  Fly   445 YFEPGHYTVMENCGEFEVRVVRR--------GDISTYASVEYE--TQDGTASA--GTDFVGRK-- 495
             |....|.|.|:.....:.|:|.        |...|..|:.|:  |.|.||.|  ..||:..:  
Mouse   291 -FMQSVYVVPEDDHVLTIPVLRGKDSDGNLIGSDETQVSIRYKVMTWDSTAHAQQNVDFIDLQPD 354

  Fly   496 GLLSFPPGVDEQRFRIEVIDDDVFEEDECFYIRLF-NPSEG-VKLAVPMIATVMILDDDHA-GIF 557
            ..|.|||.|.|...:.::|||.:.|..|.|:|.|. |..:| ..|..|....|.|..:|.. |:.
Mouse   355 TTLVFPPFVHESHLKFQIIDDLIPEIAESFHIMLLKNTLQGDAVLMGPSTVQVTIKPNDKPYGVL 419

  Fly   558 AFTDSVF-------EITESVGRF-ELKVMRYSGARGTVIVPYW--TEN--DTATESKDYEGARGE 610
            :|...:|       |.|.|..|| |:.|:|..|..|.|.|. |  |.|  |.:..:.|...|.|.
Mouse   420 SFNSILFERPVIIDEDTASSSRFEEIAVVRNGGTHGNVSVS-WVLTRNSSDPSPVTADITPASGT 483

  Fly   611 LVFENNESEKFIDLFILEESSYEKDVSFKV-----------HIGEPRLAPDDTNKESFFNRFFEK 664
            |.|...:....|.|.:.::...|:..::.:           .:.||        .:..|      
Mouse   484 LQFAQGQMLAPISLVVFDDDLPEEAEAYLLTILPHTIQGGAEVSEP--------AQLLF------ 534

  Fly   665 HEHSGEPTHDELA---AKIKEVEKKPVQDLTELDRILLLSKPRNGELTTAYVRIRESQEF--KAT 724
            :....:..:.|:|   .:.:::|..|      .:|.|.||..|.|. :...||:..|..:  ...
Mouse   535 YIQDSDNVYGEIAFFPGESQKIESSP------SERSLSLSLARRGG-SKGDVRVIYSALYIPAGA 592

  Fly   725 VDKLVAKANVSAVLGTSS-----WKEQFKDALTVIPADESEFDNDDEEEEVPSCFSYVSHFVCLF 784
            :|.|.||   ..:|.||.     :.||.:.....:|.....|..:.            :||:...
Mouse   593 MDPLRAK---DGILNTSRRSSLLFPEQNQQVSIKLPIRNDAFLQNG------------AHFLVQL 642

  Fly   785 WKV----LFAFVPPTDICGGYVTFVVSIFVIGVITAIIGDAASYFGCALNI-------KDSVTAI 838
            ..|    :|..:||.....|.:. .:|:.|...|      |....|...|:       |||...:
Mouse   643 EAVVLVNIFPPIPPVSPRFGEIR-NISLLVTPAI------ANGEIGFLSNLPIILHEPKDSSAEV 700

  Fly   839 LFVAL---GTS---------IPDTFASMIAAKHDEGADNCIGNV---TGSNAVNV 878
            :.:.|   ||.         .|..|.|......|.|..|  |:|   :|.|..::
Mouse   701 VSIPLHRDGTDGQATVYWSLRPSGFNSKAVTLDDAGPFN--GSVVFLSGQNETSI 753

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalxNP_001247215.1 caca 4..973 CDD:273296 207/899 (23%)
Na_Ca_ex 126..297 CDD:279963 44/194 (23%)
Na_Ca_ex_C 300..414 CDD:293103 28/120 (23%)
Calx_beta 441..529 CDD:197594 31/101 (31%)
Calx_beta 554..643 CDD:197594 27/112 (24%)
Na_Ca_ex 800..965 CDD:279963 23/100 (23%)
Adgrv1XP_017170852.1 caca <79..>262 CDD:273296 48/218 (22%)
caca <273..>515 CDD:273296 71/269 (26%)
caca <707..>1001 CDD:273296 12/48 (25%)
caca <1028..>1231 CDD:273296
Laminin_G_3 1369..1518 CDD:379155
Calx-beta 1596..1688 CDD:383005
caca <1649..>1831 CDD:273296
caca <1752..>1974 CDD:273296
caca <1907..>2101 CDD:273296
caca <2151..>2346 CDD:273296
caca <2518..>2698 CDD:273296
caca <2628..>2812 CDD:273296
caca <2898..>3098 CDD:273296
caca <3026..>3197 CDD:273296
EPTP 3419..3460 CDD:367630
caca <3610..>3766 CDD:273296
caca <3911..>4147 CDD:273296
caca <4275..>4511 CDD:273296
Calx_beta 4291..4379 CDD:197594
caca <4418..>4644 CDD:273296
caca <4901..>5116 CDD:273296
Calx-beta 5025..5117 CDD:383005
GPS 5873..5919 CDD:383024
7tm_GPCRs 5940..6180 CDD:391938
TM helix 2 5959..5983 CDD:341315
TM helix 3 5992..6018 CDD:341315
TM helix 4 6031..6051 CDD:341315
TM helix 5 6078..6103 CDD:341315
TM helix 6 6122..6148 CDD:341315
TM helix 7 6152..6177 CDD:341315
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1306
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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