Sequence 1: | NP_001262788.1 | Gene: | Grik / 42476 | FlyBaseID: | FBgn0038840 | Length: | 907 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_180048.1 | Gene: | GLR2.2 / 817008 | AraportID: | AT2G24720 | Length: | 920 | Species: | Arabidopsis thaliana |
Alignment Length: | 984 | Identity: | 195/984 - (19%) |
---|---|---|---|
Similarity: | 386/984 - (39%) | Gaps: | 187/984 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 FILTSLLLAFPGCRGE-----RTNVGLVYE--NTDPDLEKI-FHLAISKANEENEDLQLH-GVSV 72
Fly 73 SIEPGNSFETSKKLCKMLRQNLV-AVFGPTSNLAARHAMSICDAKELPFLDTRWDFGAQLPTINL 136
Fly 137 HPHP---------ATLGVALRDMVVALGWESFTIIYESGEY----LPTVRELLQMYGTAGPTVTV 188
Fly 189 R---RYELDLNGNYRNV---LRRIRNADDFSFVVVGSMATLPEFFKQAQQVGLVTSDYRYIIGNL 247
Fly 248 DWHTMD-LEPYQHAG----TNITGLRLVSPDSEQVQEVAKALYESEEPFQNVSCPLTNSMAL-VY 306
Fly 307 DGVQLLAETYKHVNFRPVALSCNDDSAWDK-----------GYTLVNYMKSLTLNGLTGPIRFDY 360
Fly 361 EGLRTDFKLEVIELAVSGMQKIGQWSGEDGF-----QENRPAPAHSLEPD-MRSLVNKSFVVITA 419
Fly 420 ISEPYG----------------------MLKETSEKLEGNDQFEGFGIELIDELSKKLGFSYTWR 462
Fly 463 LQEDNKYGGIDPKTGEWNGMLREIIDSRADMGITDLTMTSERESGVDFTIPFMSLGIGILFRKPM 527
Fly 528 KEPPK--LFSFMSPFSGEVWLWLGLAYMGVSISMFVLGRLSPAEWDNPYPCIEEPTELENQFSFA 590
Fly 591 NCLWFSIGALLQQGSELAPK----AYSTRAVAASWWFFTLILVSSYTANLAAFLTVESLVTPIND 651
Fly 652 ADDLSKNKGGVNYGAKIGGATFNF----FKESNYP--------TYQRMYEFMRDNPQYMTNTNQE 704
Fly 705 GVDRVENSNYAFLMESTTIEYITERRCTLTQVGALLDEKGYGIAMRKNWPYRDTLSQAVLEMQEQ 769
Fly 770 GLLTKMKTKWWQEKRGGGACSD--ADEDSGAVALEISNLGGVFLVMGVGSFFGIF-VSLLEMVLG 831
Fly 832 VKERSDENQVSFKTELLDEIRFILQCSGNTKAVKYPKNSSRSNASSKSKGSSMSVDSLPEDTSEA 896
Fly 897 DASGKHNHG 905 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Grik | NP_001262788.1 | PBP1_iGluR_Kainate | 37..391 | CDD:107377 | 71/394 (18%) |
ANF_receptor | 53..374 | CDD:279440 | 63/358 (18%) | ||
Periplasmic_Binding_Protein_Type_2 | 411..781 | CDD:304360 | 87/409 (21%) | ||
Lig_chan | 543..816 | CDD:278489 | 58/290 (20%) | ||
GLR2.2 | NP_180048.1 | PBP1_GABAb_receptor | 33..412 | CDD:107361 | 73/400 (18%) |
ANF_receptor | 47..392 | CDD:279440 | 63/366 (17%) | ||
HisJ | 438..>587 | CDD:223904 | 39/152 (26%) | ||
GluR_Plant | 452..801 | CDD:270404 | 82/386 (21%) | ||
Lig_chan | 582..819 | CDD:278489 | 56/272 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 82 | 0.746 | Domainoid score | I2907 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 137 | 1.000 | Inparanoid score | I1813 |
OMA | 1 | 1.010 | - | - | QHG60082 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 1 | 1.000 | - | - | mtm1027 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 8.070 |