Sequence 1: | NP_001262788.1 | Gene: | Grik / 42476 | FlyBaseID: | FBgn0038840 | Length: | 907 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001072565.1 | Gene: | grik5-like.1 / 780020 | XenbaseID: | XB-GENE-5860197 | Length: | 479 | Species: | Xenopus tropicalis |
Alignment Length: | 483 | Identity: | 169/483 - (34%) |
---|---|---|---|
Similarity: | 263/483 - (54%) | Gaps: | 50/483 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 412 KSFVVITAISEPYGMLKETSEKLEGNDQFEGFGIELIDELSKKLGFSYTWRLQEDNKYGGIDPKT 476
Fly 477 GEWNGMLREIIDSRADMGITDLTMTSERESGVDFTIPFMSLGIGILFRK-PMKEPPKLFSFMSPF 540
Fly 541 SGEVWLWLGLAYMGVSISMFVLGRLSPAEWDNPYPCIEEPTEL---ENQFSFANCLWFSIGALLQ 602
Fly 603 QGSELAPKAYSTRAVAASWWFFTLILVSSYTANLAAFLTVESL-VTPINDADDLSKNKGGVNYGA 666
Fly 667 KIGGATFNFFKESNYPTYQRMYEFM-RDNPQYMTNTNQEGVDRVENSNYAFLMESTTIEYITERR 730
Fly 731 CTLTQVGALLDEKGYGIAMRKNWPYRDTLSQAVLEMQEQGLLTKMKTKWWQEKRGGGACSDADED 795
Fly 796 SGAVALEISNLGGVFLVMGVGSFFGIFVSLLEMVLGVKERSDENQVSFKTELLDEIRFILQCSGN 860
Fly 861 TKAVKYPKNSSRSNASSKSKGSSMSVDS 888 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Grik | NP_001262788.1 | PBP1_iGluR_Kainate | 37..391 | CDD:107377 | |
ANF_receptor | 53..374 | CDD:279440 | |||
Periplasmic_Binding_Protein_Type_2 | 411..781 | CDD:304360 | 146/374 (39%) | ||
Lig_chan | 543..816 | CDD:278489 | 102/277 (37%) | ||
grik5-like.1 | NP_001072565.1 | PBP2_iGluR_non_NMDA_like | 41..396 | CDD:270403 | 146/374 (39%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |