| Sequence 1: | NP_001262788.1 | Gene: | Grik / 42476 | FlyBaseID: | FBgn0038840 | Length: | 907 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_009304490.1 | Gene: | grin2ab / 570493 | ZFINID: | ZDB-GENE-070424-223 | Length: | 1445 | Species: | Danio rerio |
| Alignment Length: | 882 | Identity: | 191/882 - (21%) |
|---|---|---|---|
| Similarity: | 358/882 - (40%) | Gaps: | 228/882 - (25%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 64 DLQLHGVSVS-IEPGNSFETSKKLCKML-RQNLVA-VFGPTSNLAARHAMSICDAKELPFLDTRW 125
Fly 126 DFGAQLPTINLHPHPA-------------TLGVALRD---MVVAL----GWESFTIIYES----G 166
Fly 167 EYLPTVRELLQMYGTAGPTVTVR----RYELD----LNG-----NYRNV-LRRIR--------NA 209
Fly 210 DDFSFVVVGSMATLPEFFKQAQQVGLVTSDYRYII-----GNLDWHTMDLEPYQHAGTNITGLRL 269
Fly 270 VSPDSEQVQEVAKALYESEEPFQNVSCPLTNSMALVY-------DGVQLLAETYKHVNFRPVALS 327
Fly 328 CNDDSAWDKGYTLVNYMKSLTLNGLTGPIRFDYEGLRTDFKLEVIELAVS-GMQKIGQWSGEDGF 391
Fly 392 QENRPA-------PAHSLEPDMR---------SLVNKSFVVITAISEPYGMLKETS--------- 431
Fly 432 EKLEGN---DQFEGFGIELIDELSKKLGFSYTWRLQEDNKYGGIDPKTGEWNGMLREIIDSRADM 493
Fly 494 GITDLTMTSERESGVDFTIPFMSLGIGILF-RKPMKEPPKLFSFMSPFSGEVWLWLGLAYMGV-S 556
Fly 557 ISMFVLGRLSP-------AEWDNPY-PCIEEPTELENQFSFANCLWFSIGALLQQGSELA-PKAY 612
Fly 613 STRAVAASWWFFTLILVSSYTANLAAFLTVESLVTPINDADDLSKNKGGVNY------GAKIGGA 671
Fly 672 TFNFFKESNYPTYQRMYEFMRDNPQYMTNTNQEG-VDRVENSNY----AFLMESTTIEYITER-- 729
Fly 730 RCTLTQVGA--LLDEKGYGIAMRKNWPYRDTLSQAVLEMQEQGLLTKMKTKWWQEKRGGGACSDA 792
Fly 793 DEDSGAVALEISNLGGVFLVMGVGSFFGIFVSLLEMV 829 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Grik | NP_001262788.1 | PBP1_iGluR_Kainate | 37..391 | CDD:107377 | 75/388 (19%) |
| ANF_receptor | 53..374 | CDD:279440 | 71/370 (19%) | ||
| Periplasmic_Binding_Protein_Type_2 | 411..781 | CDD:304360 | 100/407 (25%) | ||
| Lig_chan | 543..816 | CDD:278489 | 70/297 (24%) | ||
| grin2ab | XP_009304490.1 | PBP1_iGluR_NMDA_NR2 | 25..382 | CDD:107373 | 77/403 (19%) |
| ANF_receptor | 48..358 | CDD:279440 | 72/372 (19%) | ||
| PBP2_iGluR_NMDA_Nr2 | 393..790 | CDD:270436 | 103/427 (24%) | ||
| Lig_chan | 544..816 | CDD:278489 | 70/302 (23%) | ||
| NMDAR2_C | 827..1445 | CDD:287527 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C170591273 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| ZFIN | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.840 | |||||