Sequence 1: | NP_001262788.1 | Gene: | Grik / 42476 | FlyBaseID: | FBgn0038840 | Length: | 907 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_608557.4 | Gene: | GluRIIC / 33275 | FlyBaseID: | FBgn0046113 | Length: | 940 | Species: | Drosophila melanogaster |
Alignment Length: | 956 | Identity: | 285/956 - (29%) |
---|---|---|---|
Similarity: | 477/956 - (49%) | Gaps: | 96/956 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 18 ILTSLLLAFPGC--RGERTNVGLVYENTDPDLEKIFHLAISKAN--EENEDLQLHGVSVSIEPGN 78
Fly 79 SFETSKK-LCKMLRQNLVAVFGPTSNLAARHAMSICDAKELPFLDTRWDFG-----AQLP----T 133
Fly 134 INLHPHPATLGVALRDMVVALGWESFTIIYESGEYLPTVR--ELLQMYGTAGPTVTVRRYELDLN 196
Fly 197 GNYRNVLRRIRNADDFSFVVVGSMATLPEFFKQAQQVGLVTSDYRYI-IGNLDWHTMDLEPY--- 257
Fly 258 -QHAGTNITGLR-LVSPDSE-------QVQEVAKALYESEEPFQNVSCPLTNSMALVYDGVQLLA 313
Fly 314 ETYKHVNF----RPVA--LSC----NDDSAWDKGYTLVNYMKSLT----LNGLTGPIRFDYEGLR 364
Fly 365 TDFKLEVIELAVSGMQKIGQWSGEDGFQENRPAPAHSLEPDMRSLVNKSFVVITAISEPYGMLKE 429
Fly 430 TSEKLE--GNDQFEGFGIELIDELSKKLGFSYTWRLQEDNKYGGIDPKTGEWNGMLREIIDSRAD 492
Fly 493 MGITDLTMTSERESGVDFTIPFMSLGIGILFRKPMKEPPKLFSFMSPFSGEVWLWLGLAYMGVSI 557
Fly 558 SMFVLGRLSPAEWDNPYPCIEEPTELENQFSFANCLWFSIGALLQQGSELAPKAYSTRAVAASWW 622
Fly 623 FFTLILVSSYTANLAAFLTVESLVTPINDADDLSKNKGGVNYGAKIGGATFNFFKESNYPTYQRM 687
Fly 688 YEFM-RDNPQYMTNTNQEGVDRVENS--NYAFLMESTTIEYITERRCTLTQVGALLDEKGYGIAM 749
Fly 750 RKNWPYRDTLSQAVLEMQEQGLLTKMKTKWWQEKRGGGACSDADEDSGAVALEISNLGGVFLVMG 814
Fly 815 VGSFFGIFVSLLEMVLGVKERSDENQVSFKTELLDEIRFILQCSGNTKAV--KYPKNSSRSNASS 877
Fly 878 KSKGSSMSVDSLPEDT-----------------SEADASGKHNHGK 906 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Grik | NP_001262788.1 | PBP1_iGluR_Kainate | 37..391 | CDD:107377 | 101/394 (26%) |
ANF_receptor | 53..374 | CDD:279440 | 93/361 (26%) | ||
Periplasmic_Binding_Protein_Type_2 | 411..781 | CDD:304360 | 146/374 (39%) | ||
Lig_chan | 543..816 | CDD:278489 | 99/275 (36%) | ||
GluRIIC | NP_608557.4 | PBP1_iGluR_Kainate | 26..404 | CDD:107377 | 102/392 (26%) |
Periplasmic_Binding_Protein_Type_1 | <279..363 | CDD:299141 | 21/89 (24%) | ||
PBP2_iGluR_Kainate | 423..794 | CDD:270432 | 147/373 (39%) | ||
Lig_chan | 554..828 | CDD:278489 | 99/276 (36%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45462603 | |
Domainoid | 1 | 1.000 | 82 | 0.746 | Domainoid score | I2907 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 137 | 1.000 | Inparanoid score | I1813 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D17567at33392 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
7 | 7.000 |