DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grik and LOC3289757

DIOPT Version :10

Sequence 1:NP_001262788.1 Gene:Grik / 42476 FlyBaseID:FBgn0038840 Length:907 Species:Drosophila melanogaster
Sequence 2:XP_061498361.1 Gene:LOC3289757 / 3289757 VectorBaseID:AGAMI1_010049 Length:949 Species:Anopheles gambiae


Alignment Length:905 Identity:462/905 - (51%)
Similarity:636/905 - (70%) Gaps:41/905 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ERTNVGLVYENTDPDLEKIFHLAISKANEEN---EDLQLHGVSVSIEPGNSFETSKKLCKMLRQN 93
            |...:|.:::....|:|..|..|:...|.|.   .:.||...:|.::.|:.|:.|||||::|:..
Mosquito    37 EHIKIGGLFDGATEDVELAFQYAVEAVNNEKLSYSNYQLEAQAVQVKYGDQFDASKKLCRLLKTG 101

  Fly    94 LVAVFGPTSNLAARHAMSICDAKELPFLDTRWDFGAQLPTINLHPHPATLGVALRDMVVALGWES 158
            :..:|||:|..:|.|..|:||.||:|.::||||...:|||:||||||..:|....|:|||..|:|
Mosquito   102 VAGIFGPSSPKSALHVQSVCDEKEMPHIETRWDAYTKLPTLNLHPHPHIMGRVFLDLVVAFEWKS 166

  Fly   159 FTIIYESGEYLPTVRELLQMYGTAGPTVTVRRYELDLNGNYRNVLRRIRNADDFSFVVVGSMATL 223
            ||::||||.:||.:.:||:||...|.|||||:.:|.||||||.||||::.::|...::..|:.::
Mosquito   167 FTVLYESGPWLPGIADLLKMYDPKGYTVTVRQLDLGLNGNYRAVLRRVKLSEDKRIILACSIDSM 231

  Fly   224 PEFFKQAQQVGLVTSDYRYIIGNLDWHTMDLEPYQHAGTNITGLRLVSPDSEQVQEVAKALYESE 288
            ||..:|||||||:|..::.|:.:||.||:||||||::||||||:||:.|:.:::::||..|..|:
Mosquito   232 PEVLRQAQQVGLLTDHHQIIVTSLDLHTIDLEPYQYSGTNITGVRLIDPEEDKIRQVADFLNASQ 296

  Fly   289 -----------EPFQNVSCPLTNSMALVYDGVQLLAETYKHV-------NFRPVALSCNDDSAWD 335
                       .|     ..:....||:||.|.|.||..||:       ...|:||.|:|.:.|.
Mosquito   297 IAKTLELQDGLNP-----AKMRVETALMYDAVLLFAEALKHLIGSEPAHLLEPIALRCDDTATWK 356

  Fly   336 KGYTLVNYMKSLTLNGLTGPIRFDYEGLRTDFKLEVIELAVSGMQKIGQWSGEDGFQENRPAPAH 400
            .||:::|||||.|::|||..||||::|.|:||.|::|||..:|::|:|.|:..:|....|.....
Mosquito   357 NGYSVINYMKSSTIHGLTRSIRFDHQGHRSDFLLDIIELGPAGLEKVGVWNSTEGLNFTRKKEQT 421

  Fly   401 SLEPDMRSLVNKSFVVITAISEPYGMLKETSEKLEGNDQFEGFGIELIDELSKKLGFSYTWRLQE 465
            .|..|..:|.|::|:|:||||.||||||::..||.||::||||||:||.|||..|||:||:.|||
Mosquito   422 LLAFDDGTLQNRTFLVLTAISPPYGMLKDSPVKLTGNERFEGFGIDLIHELSLMLGFNYTFILQE 486

  Fly   466 DNKYGGIDPKTGEWNGMLREIIDSRADMGITDLTMTSERESGVDFTIPFMSLGIGILFRKPMKEP 530
            |..||.::..|.:||||:.|:::.|||:.|||||:||:|||.||||:|||:|||.||:|||.|||
Mosquito   487 DGVYGSLNRDTKKWNGMVLELLEWRADLAITDLTITSDRESAVDFTMPFMNLGISILYRKPTKEP 551

  Fly   531 PKLFSFMSPFSGEVWLWLGLAYMGVSISMFVLGRLSPAEWDNPYPCIEEPTELENQFSFANCLWF 595
            |.|||||||||.:|||:||.|||.||:|:|:|||:||.||||||||||||.||||||||:|.:||
Mosquito   552 PSLFSFMSPFSKQVWLYLGGAYMMVSMSLFILGRISPKEWDNPYPCIEEPEELENQFSFSNSMWF 616

  Fly   596 SIGALLQQGSELAPKAYSTRAVAASWWFFTLILVSSYTANLAAFLTVESLVTPINDADDLSKNKG 660
            :||||||||||:||||.:|||||:.|||||||:|||||||||||||||.:|:||::|:||:...|
Mosquito   617 TIGALLQQGSEIAPKAPATRAVASIWWFFTLIMVSSYTANLAAFLTVEQVVSPISNAEDLAAAGG 681

  Fly   661 GVNYGAKIGGATFNFFKESNYPTYQRMYEFMRDNPQYMTNTNQEGVDRVENSNYAFLMESTTIEY 725
            .:.||||..|:|.:|||::.|.||.:||::|..|.:.:|::|.||:.||:..|||||||||:|||
Mosquito   682 TIKYGAKRDGSTISFFKDAEYGTYAKMYQYMMANQELLTSSNPEGLQRVKTENYAFLMESTSIEY 746

  Fly   726 ITERRCTLTQVGALLDEKGYGIAMRKNWPYRDTLSQAVLEMQEQGLLTKMKTKWWQEKRGGGACS 790
            |.||.|.:||:|.|||:||||||||||.|||..||:|||.:||||:||.:|.|||:|||||||||
Mosquito   747 IVERECDVTQIGGLLDDKGYGIAMRKNSPYRSALSEAVLRLQEQGVLTSLKRKWWKEKRGGGACS 811

  Fly   791 DADEDSGAVALEISNLGGVFLVMGVGSFFGIFVSLLEMVLGVKERSDENQVSFKTELLDEIRFIL 855
            .:..|.||..|::.|:||||.|:.||..|.......|:...:..|:..::|.|:.||:.|:||:.
Mosquito   812 QSTSDDGAEELDMDNVGGVFFVLFVGCSFASLFGCCELFFVIAHRARRHKVPFREELMAELRFVA 876

  Fly   856 QCSGNTKAVKYPKNSSRS----------NASSKSK----GSSMSVDSLPEDTSEADASGK 901
            :|.||||.|::.|:||.|          :::|.||    |:.|. |.||.........||
Mosquito   877 KCHGNTKPVRHRKSSSASGENSLELDVEDSTSSSKQDISGNGMG-DRLPTGNQRRQNGGK 935

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GrikNP_001262788.1 PBP1_iGluR_Kainate 35..395 CDD:380605 160/380 (42%)
Periplasmic_Binding_Protein_Type_2 411..781 CDD:473866 245/369 (66%)
LOC3289757XP_061498361.1 None

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