Sequence 1: | NP_001262788.1 | Gene: | Grik / 42476 | FlyBaseID: | FBgn0038840 | Length: | 907 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001106213.1 | Gene: | Gria3 / 29628 | RGDID: | 70958 | Length: | 888 | Species: | Rattus norvegicus |
Alignment Length: | 876 | Identity: | 283/876 - (32%) |
---|---|---|---|
Similarity: | 456/876 - (52%) | Gaps: | 82/876 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 39 VYENTDPDLEKIFHLAISKANEENEDLQLHGVSVSIEPGNSFETSKKLCKMLRQNLVAVFGPTSN 103
Fly 104 LAARHAMSICDAKELPFLDTRWDFGAQLPTINLHPHPATLGVALRDMVVALGWESFTIIYESGEY 168
Fly 169 LPTVRELLQMYGTAGPTVTVRRYELDLNGN------YRNVLRRIRNADDFSFVVVGSMATLPEFF 227
Fly 228 KQAQQVGLVTSDYRYIIGNLDWHTMDLEPYQHAGTNITGLRLVSPDSEQVQEVAK---ALYESEE 289
Fly 290 PFQNVSCPLTNSMALVYDGVQLLAETYKHVNFRPVALS---------CNDDSAWDKGYTLVNYMK 345
Fly 346 SLTLNGLTGPIRFDYEGLRTDFKLEVIELAVSGMQKIGQWSGEDGFQENRPAPAHSLEPDMRSLV 410
Fly 411 NKSFVVITAISEPYGMLKETSEKLEGNDQFEGFGIELIDELSKKLGFSYTWRLQEDNKYGGIDPK 475
Fly 476 TGEWNGMLREIIDSRADMGITDLTMTSERESGVDFTIPFMSLGIGILFRKPMKEPPKLFSFMSPF 540
Fly 541 SGEVWLWLGLAYMGVSISMFVLGRLSPAEW---DNPYPCIEEPTELE------NQFSFANCLWFS 596
Fly 597 IGALLQQGSELAPKAYSTRAVAASWWFFTLILVSSYTANLAAFLTVESLVTPINDADDLSKNKGG 661
Fly 662 VNYGAKIGGATFNFFKESNYPTYQRMYEFMRD-NPQYMTNTNQEGVDRVENS--NYAFLMESTTI 723
Fly 724 EYITERR-CTLTQVGALLDEKGYGIAMRKNWPYRDTLSQAVLEMQEQGLLTKMKTKWWQEKRGGG 787
Fly 788 ACSDADEDS--GAVALEISNLGGVFLVMGVGSFFGIFVSLLEMVLGVKERSDENQVSFKTELLDE 850
Fly 851 IRFILQCSGNTKAVKYPKNSSRSNASSKSKG 881 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Grik | NP_001262788.1 | PBP1_iGluR_Kainate | 37..391 | CDD:107377 | 85/369 (23%) |
ANF_receptor | 53..374 | CDD:279440 | 73/338 (22%) | ||
Periplasmic_Binding_Protein_Type_2 | 411..781 | CDD:304360 | 170/382 (45%) | ||
Lig_chan | 543..816 | CDD:278489 | 126/287 (44%) | ||
Gria3 | NP_001106213.1 | PBP1_iGluR_AMPA_GluR3 | 29..400 | CDD:107382 | 85/370 (23%) |
ANF_receptor | 40..383 | CDD:279440 | 79/353 (22%) | ||
PBP2_iGluR_AMPA | 416..799 | CDD:270433 | 173/390 (44%) | ||
Glutamate binding | 502..504 | 0/1 (0%) | |||
Lig_chan | 548..829 | CDD:278489 | 126/288 (44%) |