Protein Alignment Grik and Ir41a

DIOPT Version :9

• Sequence 1: NP_001262788.1
• Gene: Grik / 42476
• FlyBaseID: FBgn0038840
• Length: 907
• Species: Drosophila melanogaster
• Sequence 2: NP_995744.4
• Gene: Ir41a / 2768714
• FlyBaseID: FBgn0040849
• Length: 648
• Species: Drosophila melanogaster
• Alignment Length: 520
• Identity: 108/520 - (20%)
• Similarity: 185/520 - (35%)
• Gaps: 145/520 - (27%)

  Fly   386 SGEDGFQENRPAPAHSLEPD-MRSLVNKSFVVITAISEPYGMLKETSEK------LEGNDQFEGF 443
            :.|..||..:     ||..| :.:|..:..::......||.::|.....      :.|...|:..
  Fly   189 ASEQRFQFGK-----SLFADKLNNLQGREVIIAGFDYPPYTVIKHNMSTNAQDMGVSGESDFKNV 248

  Fly   444 GIELIDELSKKLGF--SYTWRLQED----NKYGGIDPK-TGEWNGMLREIIDSRADMGITDLTMT 501
            .|: ..|....|.|  .:...:|.|    |.:|.:.|. :|:  |.|..:|:.:||:.|..:...
  Fly   249 YID-GTETRIVLNFCEQFNCTIQIDSSAANDWGKVYPNMSGD--GALGMLINRKADICIGAMYSW 310

  Fly   502 SERESGVDFTIPFMSLGIGILFRKPMKEPPKLFSF---MSPFSGEVW-----------LWLGLAY 552
            .|..:.:|.::..:..||..|...|:    :|.|:   :.||...:|           ..|.|||
  Fly   311 YEDYTYLDLSMYLVRSGITCLVPAPL----RLTSWYLPLEPFKETLWAAILLCLCAEATGLVLAY 371

  Fly   553 MGVSISMFVLGRLSPAEWDNPYPCIEEPTELENQFSFANCLWFSIGALLQQGSELAPKAYS--TR 615
            .... :::||    |...:..:.|.          ||..|..|.: .:.|.|:.   ||||  .|
  Fly   372 KSEQ-ALYVL----PGYREGWWTCT----------SFGVCTTFKL-FISQSGNS---KAYSLTVR 417

  Fly   616 AVAASWWFFTLILVSSYTANLAAFLTVESL------------------------VTPINDADDLS 656
            .:..:.:...||:.|.|...||:.||:.|:                        |:.|..:|:
  Fly   418 VLLFACFLNDLIITSIYGGGLASILTIPSMDEAADTVTRLRFHRLQWAANSEAWVSAIRASDE-- 480

  Fly   657 KNKGGVNYGAKIGGATFNFFKESNYPTYQRMYEFMRDNPQYMTNTNQEGVDRVENSNYAF----- 716
                     |.:....:||...|:    ..:....:|....:..|    |:|:...::|.
  Fly   481 ---------ALVKDILYNFHIYSD----DELLRLAQDQHMRIGFT----VERLPFGHFAIGNYLG 528

  Fly   717 --------LMEST-----TIEYITERRCTLTQVGALL---DEKGYGIAMRKNWPYRDTLSQAVLE 765
                    :|:..     |:.::......|.::..|:   ...|:.    |.|.||.......|:
  Fly   529 PQAIDQLVIMKDDIYFQYTVAFVPRLWPLLDKLNTLIYSWHSSGFD----KYWEYRVVADNLNLK 589

  Fly   766 MQEQGLLTKMKTKWWQEKRGGGACSDADEDSGAVALEISNLGGVFLVMGVGSFFGIFVSLLEMVL 830
            :|:|...|...||                |.|.|.|.:||..|..:|..:||.......|||:.|
  Fly   590 IQQQVQETMTGTK----------------DIGPVPLGMSNFAGFIIVWILGSAIATLTFLLELSL 638

  Fly   831  830
              Fly   639  638

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Grik	NP_001262788.1	PBP1_iGluR_Kainate	37..391	CDD:107377	1/4 (25%)
		ANF_receptor	53..374	CDD:279440
		Periplasmic_Binding_Protein_Type_2	411..781	CDD:304360	87/443 (20%)
		Lig_chan	543..816	CDD:278489	64/330 (19%)
Ir41a	NP_995744.4	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45462836
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840