Sequence 1: | NP_001262788.1 | Gene: | Grik / 42476 | FlyBaseID: | FBgn0038840 | Length: | 907 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038951440.1 | Gene: | Grin2d / 24412 | RGDID: | 2740 | Length: | 1334 | Species: | Rattus norvegicus |
Alignment Length: | 915 | Identity: | 201/915 - (21%) |
---|---|---|---|
Similarity: | 336/915 - (36%) | Gaps: | 241/915 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 93 NLVAVF-GPT-SNLAARHAMSICDAKELPFLDTRWDFGAQLPTINLHPHPATL---GVALRDMVV 152
Fly 153 AL-----GWESFTIIYESGEYLPTVRELLQMYG--TAGPTVTVRRYELDLNGNYRNVLRRIRNAD 210
Fly 211 DFSFVVVGSMATLPEFFKQAQQVGLVTSDYRYIIGNLDWHTM----------------------- 252
Fly 253 DLEPYQH---------AGTNITG---------LRLVSPDSEQVQEVAKALYES------------ 287
Fly 288 -------------EEPF---------------------QNVSCPLTNSMALVYDGVQLLAETYKH 318
Fly 319 VNFRP-VALSCNDDSAWDKGYTLVNYMKSLTLNGLTGPIRFDYEGLRTDFKLEVIELAVS-GMQK 381
Fly 382 IGQWSGEDGFQENRP---APAHSLEP-------DMRSLVNKSFVVITAISEPYGMLKET--SEKL 434
Fly 435 EGNDQF------------------EGFGIELIDELSKKLGFSYTWRLQEDNKYG-GIDPKTGEWN 480
Fly 481 GMLREIIDSRADMGITDLTMTSERESGVDFTIPFMSLGIGILFRKP--MKEPPKLFSF------M 537
Fly 538 S--PFSGEVWLWLGLAYMG-VSISMFVLGRLSPAEWDNPYPCIEEPTELENQFSFANCLWFSIGA 599
Fly 600 LLQQGSELA--PKAYSTRAVAASWWFFTLILVSSYTANLAAFLTVESLVTPINDADDLSKNKGGV 662
Fly 663 NY-----GAKIGGATFNFFKESNYPTYQRMYEFMRDNPQYMTNTNQEGVDRVENSNY-------- 714
Fly 715 AFLMESTTIEYIT--ERRCTLTQVGA--LLDEKGYGIAMRKNWPYRDTLSQAVLEMQEQGLLTKM 775
Fly 776 KTKWWQEKRGGGACSDADEDSGAVALEISNLGGVFLVMGVGSFFGIFVSLLEMV--------LGV 832
Fly 833 KERSD 837 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Grik | NP_001262788.1 | PBP1_iGluR_Kainate | 37..391 | CDD:107377 | 74/398 (19%) |
ANF_receptor | 53..374 | CDD:279440 | 71/380 (19%) | ||
Periplasmic_Binding_Protein_Type_2 | 411..781 | CDD:304360 | 108/420 (26%) | ||
Lig_chan | 543..816 | CDD:278489 | 69/292 (24%) | ||
Grin2d | XP_038951440.1 | PBP1_iGluR_NMDA_NR2 | 46..410 | CDD:380601 | 74/402 (18%) |
PBP2_iGluR_NMDA_Nr2 | 427..838 | CDD:270436 | 111/439 (25%) | ||
PHA03307 | <1125..>1312 | CDD:223039 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166349873 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |