Sequence 1: | NP_001262788.1 | Gene: | Grik / 42476 | FlyBaseID: | FBgn0038840 | Length: | 907 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_495033.2 | Gene: | nmr-1 / 173929 | WormBaseID: | WBGene00003774 | Length: | 1025 | Species: | Caenorhabditis elegans |
Alignment Length: | 895 | Identity: | 216/895 - (24%) |
---|---|---|---|
Similarity: | 365/895 - (40%) | Gaps: | 173/895 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 65 LQL-----HGVSVSIEPGNSFETSKKLCKMLRQNLVAVFGPTSNLAARHAMS--ICDAKELPFLD 122
Fly 123 TRWDFGAQLPTINLHPHP---------ATLGVALRDMVVALGWESFTIIYESGEYLPTVRELLQ- 177
Fly 178 -------MYGT-AGPTVTVRR-----YELDLNGNYRNV----LRRIRNADDFSFVVVGSMATLPE 225
Fly 226 FFKQAQQVGLVTSDYRYIIGNLDWHTMD--LEPYQHAGTNITGLRLVSPDSEQVQEVA------- 281
Fly 282 KALYESEE-------PFQNVSC--------PLTNSMALVYDGVQLLAETYKHVNFRPVALSCNDD 331
Fly 332 SA---WD--KGYTLVNYMKSLTLNGLTGPIRFDYEGLRTDFKLEVIELAVSGMQKIGQWSG---- 387
Fly 388 --EDGFQ---ENRPAPAHSLEPDMR--SLVNKSFVVITAISEPYGMLKETSE------------- 432
Fly 433 ------------KLEGNDQF---EGFGIELIDELS-----KKLGFSYTWRLQEDNKYGGIDPK-- 475
Fly 476 TG-EWNGMLREIIDSRADMGITDLTMTSERESGVDFTIPFMSLGIGILFRKPMKEPPKLFSFMSP 539
Fly 540 FSGEVWLWLGLAYMGVSISMFVLGRLSPAEWDNPYPCIEE-PTELENQF------------SFAN 591
Fly 592 CLWFSIGALLQQG-SELAPKAYSTRAVAASWWFFTLILVSSYTANLAAFLTV---ESLVTPINDA 652
Fly 653 DDLSKNKGGVNYGAKIGGATFNFFKESNYPTYQRMYEFMRDNPQYMTNTNQEGVDRVENSNY-AF 716
Fly 717 LMESTTIEYITERRCTLTQVGALLDEKGYGIAMRKNWPYRDTLSQAVLEMQEQGLLTKMKTKWWQ 781
Fly 782 EKRGGGACSDADEDSGAVALEISNLGGVFLVMGVGSFFGIFVSLLEMVLG 831 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Grik | NP_001262788.1 | PBP1_iGluR_Kainate | 37..391 | CDD:107377 | 84/394 (21%) |
ANF_receptor | 53..374 | CDD:279440 | 79/371 (21%) | ||
Periplasmic_Binding_Protein_Type_2 | 411..781 | CDD:304360 | 114/423 (27%) | ||
Lig_chan | 543..816 | CDD:278489 | 78/290 (27%) | ||
nmr-1 | NP_495033.2 | Periplasmic_Binding_Protein_type1 | 19..384 | CDD:385651 | 81/392 (21%) |
PBP2_iGluR_NMDA_Nr1 | 394..822 | CDD:270437 | 118/442 (27%) | ||
Lig_chan | 567..844 | CDD:365843 | 78/287 (27%) | ||
LITAF | 949..1017 | CDD:197841 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |