Sequence 1: | NP_001262788.1 | Gene: | Grik / 42476 | FlyBaseID: | FBgn0038840 | Length: | 907 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001106796.1 | Gene: | Gria1 / 14799 | MGIID: | 95808 | Length: | 907 | Species: | Mus musculus |
Alignment Length: | 937 | Identity: | 301/937 - (32%) |
---|---|---|---|
Similarity: | 477/937 - (50%) | Gaps: | 107/937 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 ASFPLGFILTSLLLAFPGCRGERTNVGLVYENTDPDLEKIFHLAISKANEENEDL-QLHGVSVSI 74
Fly 75 EPGNSFETSKKLCKMLRQNLVAVFGPTSNLAARHAMSICDAKELPFL------DTRWDFGAQLPT 133
Fly 134 INLHPHPATLGVALRDMVVALGWESFTIIYESGEYLPTVRELLQMYGTAGPTVTVRRYELDLNGN 198
Fly 199 YRNVLRRIRNADDFSFVVVGSMATLPEFFKQAQQVGLVTSDYRYIIGNLDWHTMDLEPYQHAGTN 263
Fly 264 ITGLRLVSPDSEQVQEVAKALYESEEPFQNVSCPLTN---------------SMALVYDGVQLLA 313
Fly 314 ETYKHVNFRPVALS---------CNDDSAWDKGYTLVNYMKSLTLNGLTGPIRFDYEGLRTDFKL 369
Fly 370 EVIELAVSGMQKIGQWSGEDGFQENRPAPAHS-LEPDMRSLVNKSFVVITAISEPYGMLKETSEK 433
Fly 434 LEGNDQFEGFGIELIDELSKKLGFSYTWRLQEDNKYGGIDPKTGEWNGMLREIIDSRADMGITDL 498
Fly 499 TMTSERESGVDFTIPFMSLGIGILFRKPMKEPPKLFSFMSPFSGEVWLWLGLAYMGVSISMFVLG 563
Fly 564 RLSPAEWDNPYPCIEE-----PTELENQFSFANCLWFSIGALLQQGSELAPKAYSTRAVAASWWF 623
Fly 624 FTLILVSSYTANLAAFLTVESLVTPINDADDLSKNKGGVNYGAKIGGATFNFFKESNYPTYQRMY 688
Fly 689 EFMRD-NPQYMTNTNQEGVDRVENS--NYAFLMESTTIEYITERR-CTLTQVGALLDEKGYGIAM 749
Fly 750 RKNWPYRDTLSQAVLEMQEQGLLTKMKTKWWQEKRGGGACSDADEDSGA----VALEISNLGGVF 810
Fly 811 LVMGVGSFFGIFVSLLEMVLGVKERSDENQVSFKTELLDEIRFILQCSGNTKAVK---YPKNSSR 872
Fly 873 SNASSKSKGSS---------MSVDSLP 890 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Grik | NP_001262788.1 | PBP1_iGluR_Kainate | 37..391 | CDD:107377 | 89/384 (23%) |
ANF_receptor | 53..374 | CDD:279440 | 79/351 (23%) | ||
Periplasmic_Binding_Protein_Type_2 | 411..781 | CDD:304360 | 168/378 (44%) | ||
Lig_chan | 543..816 | CDD:278489 | 123/285 (43%) | ||
Gria1 | NP_001106796.1 | PBP1_iGluR_AMPA_GluR1 | 26..389 | CDD:107385 | 89/387 (23%) |
ANF_receptor | 37..372 | CDD:279440 | 81/359 (23%) | ||
PBP2_iGluR_AMPA_GluR1 | 406..787 | CDD:270447 | 171/386 (44%) | ||
Glutamate binding. /evidence=ECO:0000250 | 492..494 | 0/1 (0%) | |||
Lig_chan | 538..817 | CDD:278489 | 123/286 (43%) |