DRSC/TRiP Functional Genomics Resources

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Protein Alignment Grik and LOC1276211

DIOPT Version :10

Sequence 1:NP_001262788.1 Gene:Grik / 42476 FlyBaseID:FBgn0038840 Length:907 Species:Drosophila melanogaster
Sequence 2:XP_061508400.1 Gene:LOC1276211 / 1276211 VectorBaseID:AGAMI1_008450 Length:1798 Species:Anopheles gambiae


Alignment Length:54 Identity:10/54 - (18%)
Similarity:20/54 - (37%) Gaps:16/54 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 HTQYAPVSEIPTRQEDEERRNLMPDSK------------DSCMSSAEESDRMLD 198
            ||:.....::|...:|:.    .|.||            .:|.:.:.:.|..:|
Mosquito   338 HTEMRKCRKLPGMPDDKH----TPISKYFEGTLQSSVICQTCRNCSNKIDEFMD 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GrikNP_001262788.1 PBP1_iGluR_Kainate 35..395 CDD:380605 10/54 (19%)
Periplasmic_Binding_Protein_Type_2 411..781 CDD:473866
LOC1276211XP_061508400.1 None
Blue background indicates that the domain is not in the aligned region.

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