Sequence 1: | NP_001262788.1 | Gene: | Grik / 42476 | FlyBaseID: | FBgn0038840 | Length: | 907 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_597702.2 | Gene: | GRIN3A / 116443 | HGNCID: | 16767 | Length: | 1115 | Species: | Homo sapiens |
Alignment Length: | 962 | Identity: | 197/962 - (20%) |
---|---|---|---|
Similarity: | 360/962 - (37%) | Gaps: | 255/962 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 ASFPLGFILT----------SLLLAFPGCRGERTNVGLV-----------------YENTDPDLE 48
Fly 49 KIFHLAISKANEENEDLQLHGVSVSI-EPGNSFETSKKLCKMLRQNLVAVFGPTSNLAARHAMSI 112
Fly 113 CDAKELPFLDTRWDFGAQLPTINLHPHPATLGVALRDMVVALGWESFTIIYESGEYLPTVRELL- 176
Fly 177 ----QMYGTAGPTVTVRRYELDLNGNYRNVLRRIRNADDFSFVVVGSMATLPEFFKQAQQVGLVT 237
Fly 238 SDYRYIIGNLDWHTMDLEPYQHAGTNITGLRLVSPDSEQVQEVAK-----ALYESEEPFQNV-SC 296
Fly 297 PLTNSMALVYDGVQLLAETYKHVNFRPVALSCNDDSAWD--KGYTLVNYMKSLTLNGLTGPIRFD 359
Fly 360 YEGLRTD------FKLEVIELAVSGMQKIGQWSG----------EDGFQENRPAPAHSLEPDMR- 407
Fly 408 -SLVNKSFVVITAISE----PYGML--------KETSEKL-----EGND----QFE----GFGIE 446
Fly 447 LIDELSKKLGFSYTWRLQEDNKYGGIDPKTGEWNGMLREIIDSRADMGITDLTMTSERESGVDFT 511
Fly 512 IPFMSLGIGILFRKPMKEPPKLFSFMSPFSGEVWLWLGLAYMGVSISMFVLG-RLSPAEWDNPYP 575
Fly 576 CIEEPTELENQFSFANCLWFSIGALLQQGSELA---PKAYSTRAVAASWWFFTLILVSSYTANLA 637
Fly 638 AFLTVESLVTPINDADD--LSKNKGGVNYGAKIGGATFNFFKESNYPTYQRMYEFMRDNPQYMTN 700
Fly 701 TNQEGVDRVENSNY---AFLMESTTIEY--ITERRCTLTQVGALLDEKGYGIAMRKNWPYRDTLS 760
Fly 761 QAVLEMQEQGLLTKMKTKWWQEKRGGGACSDADEDSGAVALEISNLGGVFLVMGVGSFFGIFVSL 825
Fly 826 LEMVL------GVKERS---------------------DENQVSFKTELLDE 850 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Grik | NP_001262788.1 | PBP1_iGluR_Kainate | 37..391 | CDD:107377 | 67/400 (17%) |
ANF_receptor | 53..374 | CDD:279440 | 59/340 (17%) | ||
Periplasmic_Binding_Protein_Type_2 | 411..781 | CDD:304360 | 100/405 (25%) | ||
Lig_chan | 543..816 | CDD:278489 | 65/283 (23%) | ||
GRIN3A | NP_597702.2 | PBP1_iGluR_NMDA_NR3 | 30..497 | CDD:107372 | 78/433 (18%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 59..118 | ||||
ANF_receptor | 127..469 | CDD:279440 | 74/405 (18%) | ||
PBP2_iGluR_NMDA_Nr3 | 512..908 | CDD:270438 | 101/414 (24%) | ||
Lig_chan | 676..942 | CDD:278489 | 65/284 (23%) | ||
PPP2CB binding site. /evidence=ECO:0000250 | 951..987 | 3/35 (9%) | |||
GIT1-binding. /evidence=ECO:0000250|UniProtKB:Q9R1M7 | 1062..1095 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165155950 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |