Sequence 1: | NP_001262788.1 | Gene: | Grik / 42476 | FlyBaseID: | FBgn0038840 | Length: | 907 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_780690.2 | Gene: | Grik4 / 110637 | MGIID: | 95817 | Length: | 956 | Species: | Mus musculus |
Alignment Length: | 883 | Identity: | 315/883 - (35%) |
---|---|---|---|
Similarity: | 493/883 - (55%) | Gaps: | 62/883 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 WFVKMISTEASFPLGFILTSLLLAFPGC-RGERTNVGLVYENTDPDLEKIFHLAISKANEENEDL 65
Fly 66 QLHGVSVSIEP---GNSFETSKKLCKMLRQNLVAVFGPTSNLAARHAMS-ICDAKELPFLD---- 122
Fly 123 --TRWDFGAQLPTINLHPHPATLGVALRDMVVALGWESFTIIYESGEYLPTVRELLQMYGTAGPT 185
Fly 186 VTVRRYELDLNGNYRNVLRRIRNADDFSFVVVGSMATLPE-FFKQAQQVGLVTSDYRYIIGNLDW 249
Fly 250 HTMDLEPYQHAGTNITGLRLVSPDSEQVQEVAKALYES-EEPFQNVSCPLTN---SMALVYDGVQ 310
Fly 311 LLAETYKHVN------FRPVALSCNDDSAWDKGYTLVNYMKSLTLNGLTGPIRFDYEGLRTDFKL 369
Fly 370 EVIELAVSGMQKIGQWSGEDGFQENRPAPAHSLEPDMRSLVNKSFVVITAISEPYGMLKETSEKL 434
Fly 435 EGNDQFEGFGIELIDELSKKLGFSYTWRLQEDNKYGGIDPKTGEWNGMLREIIDSRADMGITDLT 499
Fly 500 MTSERESGVDFTIPFMSLGIGILFRKPMKEPPKLFSFMSPFSGEVWLWLGLAYMGVSISMFVLGR 564
Fly 565 LSPAEWDNPYPCIEEPTE-LENQFSFANCLWFSIGALLQQGSELAPKAYSTRAVAASWWFFTLIL 628
Fly 629 VSSYTANLAAFLTVESLVTPINDADDLSKNKGGVNYGAKIGGATFNFFKESNYPTYQRMYEFM-R 692
Fly 693 DNPQYMTNTNQEGVDRVENSNYAFLMESTTIEYITERRCTLTQVGALLDEKGYGIAMRKNWPYRD 757
Fly 758 TLSQAVLEMQEQGLLTKMKTKWWQEKRGGGACSDADEDSGAVALEISNLGGVFLVMGVGSFFGIF 822
Fly 823 VSLLEMVLGVKERSDENQVSFKTELLDEIRFILQCSGN 860 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Grik | NP_001262788.1 | PBP1_iGluR_Kainate | 37..391 | CDD:107377 | 98/374 (26%) |
ANF_receptor | 53..374 | CDD:279440 | 92/341 (27%) | ||
Periplasmic_Binding_Protein_Type_2 | 411..781 | CDD:304360 | 176/371 (47%) | ||
Lig_chan | 543..816 | CDD:278489 | 130/274 (47%) | ||
Grik4 | NP_780690.2 | Periplasmic_Binding_Protein_type1 | 24..402 | CDD:385651 | 107/404 (26%) |
PBP2_iGluR_kainate_KA1 | 415..785 | CDD:270442 | 176/371 (47%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 931..956 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167846203 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG60082 | |
OrthoDB | 1 | 1.010 | - | - | D60688at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000021 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100167 | |
Panther | 1 | 1.100 | - | - | O | PTHR18966 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 8.860 |